| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2110 |
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| Symbol | |
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| ID | 5058573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2385615 |
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| End bp | 2387060 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640474373 |
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| Product | LVIVD repeat-containing protein |
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| Protein accession | YP_001158939 |
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| Protein GI | 145594642 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5276] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.554457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0831107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAT CCCGCACGCC GCGGTCCCGC TGGCTCGGCA CGCTGAGCCT GGCCGCGGCC
GGCCTTCTCC TGACAACTGT GGTCGCCGCA GCGCCCCACG ACGCCAGGGC GGCCACCACC
GAGTCCAACG CCGTCACCAC CGCGGATATC CCCGGGGTCG ACGAGATCCG CAGCAGCCCC
AACCTGAGGC AGGTCGCCAA CCTGCCGAAG GAAGCACCGC TCGACGCGAC GAACAGCGAC
CTCGCCTTCC AGGGCCGGTA CGCCTTCGCC GGCAACTACA ACGGCTTCGT CATCTACGAC
ATCTCGCGTC CTTCCGCACC GACCGTCGTC TCACGCGTGC TCTGCCCGGG CTCGCAGAAT
GACATCTCCG TCCACGGCGA CCTGCTCTTC CTCTCCACCG ACTCGCCCCG CAGCGACGAC
TCGTGCGACA GCACCCGAGT GCCGTCAAGC GAGACCCAGT GGGAGGGCAT CAAGATCTTT
GACATCAGCG ACAAGGCCAG TCCCCGCTAT CTGAAGAGCG TGCAGACCGC CTGCGGTTCG
CACACCCACA CGCTGGTTCC CGGCCGGAAC AGCGCGACGA TGTACATCTA CGTCTCGTCG
TACGGCCCGT CGGACACGTA CGTCGGCTGC CCGCCACCGC ACGACTCGAT CTCCATCGTG
AAGGTGCCGG TACACCGGCC CACCGACGCC GCGGTGGTCG CCATGCCGAA TCTCTTCCCC
GACGGCGGCT TCGAGGGCGT GCCGGGGCAG AAGTCGGCGA CCAGCGGTTG CCACGACATC
ACCGCCTACC CGTCGAAGAA CCTGGCCGCC GGCGCCTGCA TGGGTGACGG CATCCTGATG
GACATCTCGG ACCGGGAGGC TCCCCGGGTC ATCAACCGCG TCCGGGACAC CGAAAACTTC
GCCTTCTGGC ACTCCGCCAC CTTCAACAAC GCCGGCACAA AAGTGATCTT CACCGATGAG
CTGGGCGGTG GCGGTGCCCC CACCTGCAAC GACACCATCG GCCCCAACCG GGGGGCCGAC
GCAATCTACG ACATCGTCGG TCGCGGCGAC CGCCGCACCA TGGTCTTCGG CAGCTACTTC
AAGATCCCGC GGGAGAACGC CGACACCGAG AACTGTGTGG CGCACAACGG CTCGCTGATC
CCGGTGTTCG GGCGGGACAT CATGGTCCAG GCGTGGTACC AGGGCGGCAT TTCGGTCTGG
GACTTCACCA ACTCGGCCAG TCCCCGCGAG ATCGCGTACT GGGAGCGGGG CCCGCTGGAC
GGGGAGAACC TCATCGGCGG CGGCTCCTGG TCCGCGTACT GGTACAACGG CTACATCTAC
TCCAACGACA TGGTCAAGGG CCTTGACGTT CTCAAGCTCA CCGACTGGCG GACCTGGACG
GCAAATTTCG TCCGCTACCC AGAGTTGAAC GTACAGACCC AGTCCGGTCG CTTCGGCCGC
CGGTAG
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| Protein sequence | MSRSRTPRSR WLGTLSLAAA GLLLTTVVAA APHDARAATT ESNAVTTADI PGVDEIRSSP
NLRQVANLPK EAPLDATNSD LAFQGRYAFA GNYNGFVIYD ISRPSAPTVV SRVLCPGSQN
DISVHGDLLF LSTDSPRSDD SCDSTRVPSS ETQWEGIKIF DISDKASPRY LKSVQTACGS
HTHTLVPGRN SATMYIYVSS YGPSDTYVGC PPPHDSISIV KVPVHRPTDA AVVAMPNLFP
DGGFEGVPGQ KSATSGCHDI TAYPSKNLAA GACMGDGILM DISDREAPRV INRVRDTENF
AFWHSATFNN AGTKVIFTDE LGGGGAPTCN DTIGPNRGAD AIYDIVGRGD RRTMVFGSYF
KIPRENADTE NCVAHNGSLI PVFGRDIMVQ AWYQGGISVW DFTNSASPRE IAYWERGPLD
GENLIGGGSW SAYWYNGYIY SNDMVKGLDV LKLTDWRTWT ANFVRYPELN VQTQSGRFGR
R
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