Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2080 |
Symbol | |
ID | 5058543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2354037 |
End bp | 2355380 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474343 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001158909 |
Protein GI | 145594612 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.371281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.082698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATTGCG ACGGTGTCGC CGCGGCTGGC CGTGGTCGGG TGGTCATGCT CGTGGACAAC AGCATCGACG GCGACTCCCG TGTGCAGAAG GCTGCCCGCT CGGCAGCTGA CGCGGGCTGG GACGTCACCC TGCTGGGCTG TGGCGACACC GCGCGGGAGG GACAACTTGG TACCGCTACC GTCCGCGTGC TGGCGATGCC CCGCCCCGCC GCGCGGTCCG GGGTCCGGCA GCGCCTCGTC GCCCGCGGTG GAGCGCTACT GCGGGTGGCG CGACTGCTTC GTCGGCCGTC GGAGTACGTC CAGGTGCTGC TCTGGCACGC GATCTCCGGC GACCGGGCGT GGCGGCGGCT CGAGCCGGGG CTGTGGACGT ACGAACGGGT GTTCGGTCCG GTGGTTGACG CGGTGGCGCC GGACCTGATC CACGCCCACG ACTTCCGGAT GCTCGGCGTC GCCGCCCGGG CCGTGGAGCG GGCGGAGGCG GTGGGCCGGC AGGTGAGGCT GGTGTGGGAC GCGCACGAGT GGTTGGCCGG TGCTCGACCA CGCCGCGACA ACGTGCGGTG GCTGCCGGCC CATCTCGCGT ACCTGCGGGA GTACGTGCCA CGCGTTGACG GCGTGGTCAC CGTCTCGGCT GCCCTGGCCG ACCTGCTCCG CAGCGAGTAC CGGCTGGCCG AGGAACCGAC CGTACTGCTC AACGCCCCGG CGGTGGCGGA CCCGCCACCG CCGGACGTGC CGGACCTGCG GGCCCGGTGC GGAGTCGGGC CGGAGACCCC CCTGCTGGTG TACAGCGGGG CACTTGCCGA GCAACGGGGA GTGGGAACGG TGATCGAGGC GTTGCCGCGT CTTCCCGATG TCCACCTTGC GCTGGTGGTC GGTGACGTGA GCGCGCCGTA CCTGCGGCAG CTGTTGGATG TCGCTGCGCG GCTGGGCGTG GCCGACCGGG TGCACCCCCA GCCGTACGTG CCGCACCAGC AGGTGAGCGC CTTCCTCAGC GCCGCCGACG TGGGGCTGAT CCCGCTGCAC CACTGGCCGA ACCACGAGAT CGCCTTGATC ACAAAGTTCT TCGAGTACGC CCACGCCCGG CTGCCCATTG TGGTCAGCGA CGTGCAGACG ATGGCCGACA CCGTCCGCGC TACCGGCCAG GGCGAGGTGT TCCGGGCGCG GGACGTCGGT GACCTCGTCC GCGCCGTGCA GGCGGTGCTC GCCGAACCGC AACGGTATCG CCGAAGCTAC GACGGGCCGG ACTCGCCCCT GGTTGACTGG ACCTGGGAGG CGCAAGTAGA CCGCCTCGAC GCCCTCTACC GCCGGTTGCT GAGCCCGACC GTCGAGTCCG TGGAGACGTC GTGA
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Protein sequence | MHCDGVAAAG RGRVVMLVDN SIDGDSRVQK AARSAADAGW DVTLLGCGDT AREGQLGTAT VRVLAMPRPA ARSGVRQRLV ARGGALLRVA RLLRRPSEYV QVLLWHAISG DRAWRRLEPG LWTYERVFGP VVDAVAPDLI HAHDFRMLGV AARAVERAEA VGRQVRLVWD AHEWLAGARP RRDNVRWLPA HLAYLREYVP RVDGVVTVSA ALADLLRSEY RLAEEPTVLL NAPAVADPPP PDVPDLRARC GVGPETPLLV YSGALAEQRG VGTVIEALPR LPDVHLALVV GDVSAPYLRQ LLDVAARLGV ADRVHPQPYV PHQQVSAFLS AADVGLIPLH HWPNHEIALI TKFFEYAHAR LPIVVSDVQT MADTVRATGQ GEVFRARDVG DLVRAVQAVL AEPQRYRRSY DGPDSPLVDW TWEAQVDRLD ALYRRLLSPT VESVETS
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