| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1869 |
|---|
| Symbol | |
|---|
| ID | 5058328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2137496 |
|---|
| End bp | 2138422 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640474139 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_001158709 |
|---|
| Protein GI | 145594412 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.573172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA TATTCGCCGG TACGCCGGCC GTCGCCGTCC CCACCCTCGC CGCGGTGGCC
GCCTCCCGCC ATGACCTGGT GGCGGTGCTC ACCCGCCCGG ATGCTCCGGC GGGCCGGGGC
CGTGGCCTGT CCCGCTCCCC GGTGGGTGCC TGGGCCGACG AGCACGGCAT CGAGGTCCTC
ACCCCGGCCC GGCCGCGGGA GCCGGAGTTC CTCGACCGGC TGCGCGCACT GGCACCGGAC
TGTGTGCCGG TCGTTGCCTA CGGCGCGCTG GTCCCGCCAG CCGCCCTGGA GATTCCGCGG
CATGGCTGGG TCAACCTGCA CTTCTCCCTG CTGCCCGCCT GGCGCGGCGC GGCTCCCGTG
CAGCACGCCC TGCTGCACGG CGACGAGCTG ACCGGTGCCA GCGTCTTCCA GCTCGAGGAG
GGCCTGGACA CGGGGCCGGT GTACGGCACC GTCACCGACG AGGTGCGGCC TGCCGACACC
TCGGGTGACC TGTTGGAGCG GCTGGCACAC TCCGGCGCCG AGCTGCTGAT CGCCGTGCTG
GACGCGATCG AGGAGGGCAG CGCGCGGGCG GAGCCGCAAC CGAACGACGG GGTGAGTCTG
GCGCCGAAGC TCACCGTGGC GGATGCCCGG GTGCGCTGGG GTGACCCGGC CTTCGCCGTG
GACCGGCGCG TCCGTGCCTG CTCCCCGGCC CCCGGCCCGT GGACGACCTT CCGCGACGAG
CGGGTCAAGC TCGGTCCGGT CACCCTCGTC GCGGGCGGCC CCGAGCTGAG GCCCGGCGAG
TTGTTGGTGG AGAAGTCCCG GGTGCTCGCC GGCACCGCCA GTACCCCGGT TCAGCTCGGT
GAGATCCGCG CAGCGGGCAA GAAGGCCATG CCGGCGAGCG ACTGGGCGCG TGGCGTCCGG
GTCACCGCTG GGGAGGTCCT CGCGTGA
|
|---|
| Protein sequence | MRVIFAGTPA VAVPTLAAVA ASRHDLVAVL TRPDAPAGRG RGLSRSPVGA WADEHGIEVL
TPARPREPEF LDRLRALAPD CVPVVAYGAL VPPAALEIPR HGWVNLHFSL LPAWRGAAPV
QHALLHGDEL TGASVFQLEE GLDTGPVYGT VTDEVRPADT SGDLLERLAH SGAELLIAVL
DAIEEGSARA EPQPNDGVSL APKLTVADAR VRWGDPAFAV DRRVRACSPA PGPWTTFRDE
RVKLGPVTLV AGGPELRPGE LLVEKSRVLA GTASTPVQLG EIRAAGKKAM PASDWARGVR
VTAGEVLA
|
|---|
| |