Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1850 |
Symbol | |
ID | 5058309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2116328 |
End bp | 2116738 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474120 |
Product | transcription antitermination factor NusB |
Protein accession | YP_001158690 |
Protein GI | 145594393 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.975567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGC GTCGCAAGGC GCGCAAACGG GCGCTGGACG TGCTCTTCGA GGCGGACCTG CGGGGCCGTC CACCGGTCGA GGTGCTCGCC GGCTACGTGG AGCGGATCGA GAAGCCCCGA CCGGAGCATC TGGGATACGC GGTTGGCCTG GTTGAGGGGG TCGCTGCCCG CCTGGATCGG GTTGACGAGC TGATCGCCAG CTACGCCGAG GGGTGGACGC TGGACCGGAT GCCGACTGTT GATCGGAACC TCGCCCGGAT CGCGGTCTAC GAGCTGCTCT ACGTGGACGA GATCGACGAC GCGGTAGCGA TCAGCGAGGC GGTGGAGTTG GCCCGGCAGA TGTCGACCGA CGACTCACCG CGATTCCTCA ACGGCCTCCT CGGCCGGATT GCGGAGTACG CCACCCGGTA G
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Protein sequence | MPARRKARKR ALDVLFEADL RGRPPVEVLA GYVERIEKPR PEHLGYAVGL VEGVAARLDR VDELIASYAE GWTLDRMPTV DRNLARIAVY ELLYVDEIDD AVAISEAVEL ARQMSTDDSP RFLNGLLGRI AEYATR
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