Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1711 |
Symbol | |
ID | 5058170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1960554 |
End bp | 1961489 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473983 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001158553 |
Protein GI | 145594256 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.316204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.702777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC AACTCCATCA GCTTCGGTAC TTCGTGGCGG TCGCAGAAGT ACGACATTTC ACCCAAGCAG CCGACTTCGT TGGCATAACG CAGCCCTCGT TGAGTAAGCA AATTCACGCT CTGGAGACTG AACTCGGCAC CCCGCTCTTC GAGCGGGTAA GGGGAAAGAT CGGGCTCACT GCCGCGGGTG AGGTACTGCT GCCGTTCGCC AAACGGATCC TCACCGATGT GGAGATCGCT ACCCGGGAGG TGCAGGAGCT GGTCGGCCTA CGGCGGGGTC GGGTACGCCT CGGTGCGACC CCCAGTCTGG CCACCTCGCT GGCCCCACCC GTGCTGCGCC GCTTCCGTGA CGCTCACCCG ACCGTTGACC TGTGGGTCGA GGAGGGCGGC TCTCAGGACC TGGTCCGGCA CCTGCTCCGC GGCGACCTGG ATCTGGCATT GATCATCGCG CCCGCCCAGG GCACCGACCC CGGGCTACGC ACCGATGCGA TCCTCACCGA GAGCCTGGTG GTCGCCAGCG TCGGGCCCCT GACGGACTCT CCGTCGGCGC ACCCGATGCG CGTCGTCGAC CTGCATGGCC AGCCACTGGT GATGTTTCGG GAGGGGTACG ACCTGCGGGA CGCCACCCTG CAGGCGTGCC GGGAGGCTGG CTTCGAGCCC CGGATCTCGG TGGACGGCGG GGAGATGGAC TCCGTGCTCA GCTTCGTCTC GGCCGGGCTG GGCGTCGCCC TGGTGCCCGG CAGTGTCGTC GCCAGCCGGC CCGGAATCCA CGTCACCCGA CTCGCCTCGC CCGGCGTTCG CCGCACCATC GCGGTCGCCC GCCGCCGGGA TGTCGTCCCC ACCCATGCCG GCCGGGAGCT ACGTCGCATC CTGCTCGAGT ACGTTGACGA CGCGGTCGCC ACCGCTGCCC TGCCATCCGG CCTCGAGCCC CGCTAG
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Protein sequence | MKMQLHQLRY FVAVAEVRHF TQAADFVGIT QPSLSKQIHA LETELGTPLF ERVRGKIGLT AAGEVLLPFA KRILTDVEIA TREVQELVGL RRGRVRLGAT PSLATSLAPP VLRRFRDAHP TVDLWVEEGG SQDLVRHLLR GDLDLALIIA PAQGTDPGLR TDAILTESLV VASVGPLTDS PSAHPMRVVD LHGQPLVMFR EGYDLRDATL QACREAGFEP RISVDGGEMD SVLSFVSAGL GVALVPGSVV ASRPGIHVTR LASPGVRRTI AVARRRDVVP THAGRELRRI LLEYVDDAVA TAALPSGLEP R
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