| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1596 |
|---|
| Symbol | |
|---|
| ID | 5058054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1816090 |
|---|
| End bp | 1817778 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640473869 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158440 |
|---|
| Protein GI | 145594143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.117286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTCCG GCTTCGGTGA CCTGACTGAC CACGCGCATC ATCTGGTGGC TACCGGCGAC
CTCGCCGGCG CCCAGCGGCT CCTCTCCGAC GCGCTGACCG ACGCCGACCC ACGGCCTACC
AAGGCCAGCG CCGAGTTGGC CGAGTTGGCG AGCCTACAGG CGAGGGTGCT GGTGGGGCTC
GGCGATCCGC AGGCCGCGCG AGGTTGGGCC GCCTACGCGT ACGCAGCCAG CAACCACCTG
CACGGCCGCT CGGACGAACG GACCGTCACG GCAGCCGCCA CCCTGGCCGC GGTGTTGCAC
CGGGTCGGTA GTTGGTCCCG GGCAGCCCGG ATCTACCAGG AGGTGATTAT CGAGCTGACC
GCCCTGGACG GCCCGGAGGC GCTTCGCGTT CTCGCCGCGC ACGCCGATCT GGCCACGCTG
GAGTACGCCC GCGGACAGTG CCGGGTGGCC CGCGACCGGC TCGCCGACGC GTGGGAGCTG
CACCGCGAGG TGTACGGCGA CGGGCATCCC AGCGGCATCA AGATGCTCGC CCGACTCGGC
GCGATGCAGC GCGACTGCGG GTTGTTCGCT TCGGCGCAGG AGAGCCTGGC GCTGGCCGAG
GAGTTGTGCC GCCAGCACCT GGCCGAGGAG GACCCACTGG CGGGGCAGGT GGCCGCGCTG
GGCCGGGCGG CGGCTGATCC GGAGCACCGC TGTGGCGGCC GTGCCGCAGA CGGGCGGGAG
GCCCCGATCG TGCCGGCCGC TCGGACGCCC CCGCCGGGAG AGGGGCCGCT CCCCGAGGAC
CGCCTGCTAC CCGACGACGG GCTGCTACCC CACCACGGAT CGCTTCCCGA CGACGAGCTA
CTACCCGACG ACGCGCCACT GGATGAGGCC GGGCCTCAGC ATCCGTCGCA GCCCGGGTAC
AAACCCGCCG ACCTGTACCG TCCGCCGGAG CCGGCCCGGC CGGTGGCCGA GGAGCATCCG
ACGGCCGGAT ACTCACCGCC GCCGACGGTC CCGACGCCCC GGCTACCGGT GGACGGCGCC
GCAGTCCACC GACCACCCGA GCCCTTCACG CCGGATTCAC CGATCAGCGG GGGCGAGCAC
GACCCGTGGC AGCCCGAGTC GTCGACCGAA CACTGGGGTG CCGCCGTACC CCCCGCGGTG
CTTCCCCTGA CCCGCCTGGA GGAGGCCGAC GGGGTCCGCC GGGTCGAACC CCACGAGTTG
CCCGACGCGC CGCCGGATCA GCCGTCGCGG CTGTTGCCGG TGCCGGTGCC GCGCGCCACA
CGGCCGCCCC GTCACCGGCT GCCACTCGTG GTGGGTGGGG TGGTGGTGCT GCTGGGGACA
GCCGCGGTGA TCGCCGGGGT ATCCCGGTTC GACGGATCGA CACCGCCGCC GGCGGCGGAC
CCGGTAACCG GGGCTCCGAC CACACCGGCG ACCACTCCCG GCACTCCGCC CGGTGAGCTG
ACCCTGACCG ACAACCGGGA CAACGTCGCC CTGAGCTGGA CCTACCCGGA GGGAGGAGAG
GGCCCGGTGG TGGTCTCGGG GGGCCAGCCC GGCGAGTCGC AGGCCGTTTT CGCCAACCTG
CCCGCCGGCA GCACCGAATT CGTCGTGCAC GGGCTCAATG GTGGCGTCGA CTACTGCTTC
GCCGTGGCGG TGGTGTGGTC GACGGAGACG ATCGCCCGCT CCGGGGATGT CTGCACCGAG
CGCGGTTGA
|
|---|
| Protein sequence | MPSGFGDLTD HAHHLVATGD LAGAQRLLSD ALTDADPRPT KASAELAELA SLQARVLVGL
GDPQAARGWA AYAYAASNHL HGRSDERTVT AAATLAAVLH RVGSWSRAAR IYQEVIIELT
ALDGPEALRV LAAHADLATL EYARGQCRVA RDRLADAWEL HREVYGDGHP SGIKMLARLG
AMQRDCGLFA SAQESLALAE ELCRQHLAEE DPLAGQVAAL GRAAADPEHR CGGRAADGRE
APIVPAARTP PPGEGPLPED RLLPDDGLLP HHGSLPDDEL LPDDAPLDEA GPQHPSQPGY
KPADLYRPPE PARPVAEEHP TAGYSPPPTV PTPRLPVDGA AVHRPPEPFT PDSPISGGEH
DPWQPESSTE HWGAAVPPAV LPLTRLEEAD GVRRVEPHEL PDAPPDQPSR LLPVPVPRAT
RPPRHRLPLV VGGVVVLLGT AAVIAGVSRF DGSTPPPAAD PVTGAPTTPA TTPGTPPGEL
TLTDNRDNVA LSWTYPEGGE GPVVVSGGQP GESQAVFANL PAGSTEFVVH GLNGGVDYCF
AVAVVWSTET IARSGDVCTE RG
|
|---|
| |