Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1501 |
Symbol | |
ID | 5057954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1713371 |
End bp | 1714042 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473769 |
Product | hydrolase |
Protein accession | YP_001158345 |
Protein GI | 145594048 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.284221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.401129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATCAGG CGATCTTGCT GGACGTGTAC GGCACGCTCG TACACGATGA TGAGAGCTCG GTCAATGACG TCTGCGTGCA GGTAGCAGAC TTGATCGCAG TCGATCCGTC TGCTATCGCG GCGGAGTGGT CCCGACGGCT GGAGGCCAGC GCCGAGATGG CGTATGGGGC CGGTTTTCGT ACGCTCGCAG ACCTGACGCT CGGCAGCCTC ACCGAGGCTG TGGCGAACTT CGGGGCGTCC GTGGAGCTTG AGCCGATCTG CCGGAAGCAG CTGCACTCCT GGCGTCATCC ACCGTTGTAC GACGACAGCC GGCCGTTCCT CGATGCTGTG ACGGTGCCGG TGTGCCTGGT CTCCGACGTC GACCAGGACG ACCTGACGGC GGTGCTGCGG TGGCACGACA TCGCCGTCGC CGCCGCGGTG ACCAGCGAAG AAGCCCGCGC ATACAAGCCC CGCCCCGAAC CGTTCCAGCT CGCGCTGGCC CGCCTCGGCC TGGGCCCCGG CGACGTGATC CACATCGGCA ACTCCGCATC GTCCGATGTC GCCGGAGCCG CCGCTCTGGG TATCGACACG GCGTTCCTCG ACCGTGCTGG AGACGGCCTG CCGCCGGGGG CCACGGCAAC CTACACCGCG GCTACGCTGA CGGCGCTGCT GCCCCAGGTG TTGCCATGTT GA
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Protein sequence | MYQAILLDVY GTLVHDDESS VNDVCVQVAD LIAVDPSAIA AEWSRRLEAS AEMAYGAGFR TLADLTLGSL TEAVANFGAS VELEPICRKQ LHSWRHPPLY DDSRPFLDAV TVPVCLVSDV DQDDLTAVLR WHDIAVAAAV TSEEARAYKP RPEPFQLALA RLGLGPGDVI HIGNSASSDV AGAAALGIDT AFLDRAGDGL PPGATATYTA ATLTALLPQV LPC
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