| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1447 |
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| Symbol | |
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| ID | 5057900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1645546 |
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| End bp | 1646772 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473715 |
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| Product | low molecular weight phosphotyrosine protein phosphatase |
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| Protein accession | YP_001158291 |
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| Protein GI | 145593994 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase
[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.562915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.811207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA CACTTCGGCG ACGCCTGCTG GCTGAGTTCA CCGGAACCGC CCTGCTGGTC
ACCGCCGTGG TCAGCTCGGG AATCATGGCC ACCACCCTCG CCCCCGACGA TGTCGGCCTT
CAACTACTGG CGAACTCGAT CACCACCGCC TTCACCCTCG GCACGCTGAT CCTGATCTTC
GGACCGGTCT CCGGGGCTCA CTTCAACCCG GTCGTCTCCG CCGCCGACTG GTTCCTCGGG
CGGCGTTCCG GCACCGGTCT GACCGCCGGC TCCCTGGGCG CCTACGGAGC GGCCCAGATC
CTTGGTGGGA TCGCCGGTGC GGTGCTGGCG CACCTGATGT TCGACCTCGC CGCGATCGAC
TTCGCTGGCA AGGAGCGGGC CGCCTGGCAC CTCTGGGTGG GAGAGGTTGT CGCCACCTCC
GGACTGGTCC TACTGATCTT CGCCCTCGCC CGTTCCGGGC GCGCGTCGGT CGCCCCGGCC
GCCGTCGGCG CCTACATCGG GGCCGCGTCC TGGTTCACCT CGTCGACCTC CTTCGCCAAT
CCCGCGGTCA CCATCGGGCG AGCGTTCTCC GACACCTTCG CCGGCATCGC CCCCACCTCG
GTGCCCGGTT TCATCCTGGC CCAGCTGGCT GGACTCGCCC TCGGCGTCGG CCTGCTCACC
GCCCTCTACC CCGACGCCGG TGCCGCCGCC GACCAGGTCG TCGTCCCCGC CGAGCCGGCA
GCGACGGGAA ACCAGGGGCC ACCGACGCGT CGAGCGGACC GCCGCCGCCC CCTGGTCAGG
TCGTCGCCCA GCTCACACCA GATCGACGAG GAGCGCCTCG GGGTCGACAG GCCCACTGTG
TTGTTCATCT GCGTCCACGA CGCCGCAGGC TCGCAGATGG CCGCCGGTTG GCTACGTCAT
CTCGCCGGCG ACACCGTCGA GGTGCGCTCC GCCGGCTCCG CCCCCGCGCG GCAGATCGAC
CCCGCCGCCG CAGTGGCCAT GTGGGAGGTC GGCATCGACA TCACCGGCCA GGTCCCGGCG
CTCCTGCGCT ACGCGACCGC GGCGTCCGCT GACGTCATCA TCACCATCGG TCGCGACAGT
GACTTTCCCG ACTTTCCAGG CGAAAGCTAC GAAAACTGGA GTCTCGACGA CCCCGCCGGC
CCGGGCGTCG AGGCGATCCG CCCGATCCGC GACGAGCTCC GGGACCGGGT GGAGCACCTG
ATCGCGGAGC TGCGCCCCAC CGCGTGA
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| Protein sequence | MTSTLRRRLL AEFTGTALLV TAVVSSGIMA TTLAPDDVGL QLLANSITTA FTLGTLILIF
GPVSGAHFNP VVSAADWFLG RRSGTGLTAG SLGAYGAAQI LGGIAGAVLA HLMFDLAAID
FAGKERAAWH LWVGEVVATS GLVLLIFALA RSGRASVAPA AVGAYIGAAS WFTSSTSFAN
PAVTIGRAFS DTFAGIAPTS VPGFILAQLA GLALGVGLLT ALYPDAGAAA DQVVVPAEPA
ATGNQGPPTR RADRRRPLVR SSPSSHQIDE ERLGVDRPTV LFICVHDAAG SQMAAGWLRH
LAGDTVEVRS AGSAPARQID PAAAVAMWEV GIDITGQVPA LLRYATAASA DVIITIGRDS
DFPDFPGESY ENWSLDDPAG PGVEAIRPIR DELRDRVEHL IAELRPTA
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