| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1430 |
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| Symbol | |
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| ID | 5057883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1607977 |
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| End bp | 1608861 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640473698 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001158274 |
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| Protein GI | 145593977 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0320804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCA AGCGCACGGC GGTGCTCGCC GCGGTCGCCG CACTGGCGCT CGGCCTGACC
GCATGCGGTG GCGACGACGC CGGTGAGGAC ACCGGCAACG GTGGTAGCGA CAAGTCCTTC
GCCGCCGGCA GCACCATGGA GCGCCTCAAC GAGGCCCAGG CAATCAAGAT CGGCACCAAG
TTCGACCAGC CGGGCTTCGG CCTCAAGGGT CTGTCGGGCG AGCCGGAAGG CTTCGACGTC
GAGATCGCAA AGATCATCGC CAAGGAGCTC GGCATCCCCG AGGACAAGAT CGAGTGGGTG
GAGACTCCCT CGAAGGTCCG TGAGGACAAG ATCGCTGATG GCAGCGTCGA CATGATCGTC
GCTACCTACA CGATCAAGGA CGAGCGCAAG GAGCGGGTCT CCTTCGCCGG GCCGTACTAC
GAGGCCGGCC AGAACATCAT GGTGAAGAAG GACGACACCT CGATCACCGG TCCTGAGTCG
TTCCAGGACG GTTCGAAGAA GATCTGCTCG GTGACCGGCT CCACGCCGAT CGAGGAGATC
AAGAAGTACC TCAAGGATAT CCCCTCCCAG CTGGTGCCGT TCGACACCTA CGACAAGTGC
CGGGACGCGC TCCAGAGTGG CCAGGTTGAC GCCGTCACCA CGGACAACGT GATCCTGCTC
GGCTACATCG CCGACGACGA GGACGCCTTC AAGCTGGCCG GCGAGAACTT CACCAAGGAG
CCCTACGGCA TCGGGGTGAA GAAGGACGAC GCCGAGTTCC GGGACTTCAT CAACGACATC
CTGGAGGAGG CGTTCACCGA CGGTAGCTGG CAGACGGCCT GGGACGACAC CGCCGGCACG
TTCGGTGCCG AGCTGGGCAC GCCGCCGACC ATCGTCCGCT ACTGA
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| Protein sequence | MRTKRTAVLA AVAALALGLT ACGGDDAGED TGNGGSDKSF AAGSTMERLN EAQAIKIGTK
FDQPGFGLKG LSGEPEGFDV EIAKIIAKEL GIPEDKIEWV ETPSKVREDK IADGSVDMIV
ATYTIKDERK ERVSFAGPYY EAGQNIMVKK DDTSITGPES FQDGSKKICS VTGSTPIEEI
KKYLKDIPSQ LVPFDTYDKC RDALQSGQVD AVTTDNVILL GYIADDEDAF KLAGENFTKE
PYGIGVKKDD AEFRDFINDI LEEAFTDGSW QTAWDDTAGT FGAELGTPPT IVRY
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