| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1378 |
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| Symbol | truB |
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| ID | 5057831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1546167 |
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| End bp | 1547150 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473647 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001158223 |
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| Protein GI | 145593926 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.758516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.467888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTG TCGCGGACGA GGTGGGCGGG GGCAGGGCCG CCCCGGGGGA AGGCGTCCCG
GTGCCGGCCG GGCCAGCCCG TCTGGCAGGC TTGGCGGTCG TGAGCGCAGA CGGACTGATC
GTGGTCGACA AGCCTGGCGG CATGACCTCG CACGACGTGG TGGCGCGGGT GCGTCGCCTA
GCCCGTACCC GGCGGGTCGG GCACGGTGGC ACGCTTGACC CGATGGCGAC CGGGGTCCTG
GTCGTCGGCG TCGGGCGCGC CACCCGGCTG CTGACCTACG TCATCGGGGC CGGGAAGAGC
TACACCGCCA CGATTCGGCT GGGGCAGGCG ACGGTCACCG ACGATGCCGA GGGTGATGTG
ATCTCCAGCA CTCCGGCTGG TCAGGTGACC GAGGAGGCGG TCCGGGCTGC GTTGGCGGTG
CAGACCGGCA CCGTGGACCA GGTGCCGAGT GCCGTCAGCG CCATCAAGAT CGACGGTCAG
CGGGCCTACC GTCGGGTTCG GGCGGGGGAC AGCGTTGATC TGCCGCCCCG ACGAGTCACC
ATCTCCCGGC TCGACATGCG GGCGCTGCGC CACGACGAGC CGGACGTGGT GGACGTGGAT
GTGGACGTCA CCTGTTCCTC CGGCACGTAC GTGCGGGCGA TCGCCCGGGA CACGGGCCGG
GCGCTCGGCG TCGGGGGACA CCTCATCGCG CTGCGGCGTA CCGCCGTGGG CGGTTTCACC
CTCGGCGAGG CCGCTACTCT CGGCGACCTG GAGCGCCGGG CACCCGAGGT GGTCACGCTC
TCCCTCGCGG CGGCGGCCGA CCGGTTCTTC CCGCGCCGTG AGGCGACCGC CGAGGAGGAG
CGGGTGCTCT CGCACGGCGG TCCGTTGGAC CCGGCCGGAA TCGACGGCCC GTACGCCGTC
TTCGGTCCGG CGGGTGGGTT GGTCGCTATC GTCAGCGAAC GGGCCGGTCG GGCCCGTGCG
GAGATCGTGC TGGCCCCGGC CTGA
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| Protein sequence | MRIVADEVGG GRAAPGEGVP VPAGPARLAG LAVVSADGLI VVDKPGGMTS HDVVARVRRL
ARTRRVGHGG TLDPMATGVL VVGVGRATRL LTYVIGAGKS YTATIRLGQA TVTDDAEGDV
ISSTPAGQVT EEAVRAALAV QTGTVDQVPS AVSAIKIDGQ RAYRRVRAGD SVDLPPRRVT
ISRLDMRALR HDEPDVVDVD VDVTCSSGTY VRAIARDTGR ALGVGGHLIA LRRTAVGGFT
LGEAATLGDL ERRAPEVVTL SLAAAADRFF PRREATAEEE RVLSHGGPLD PAGIDGPYAV
FGPAGGLVAI VSERAGRARA EIVLAPA
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