Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1267 |
Symbol | |
ID | 5057720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1429064 |
End bp | 1430179 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640473539 |
Product | cystathionine gamma-lyase |
Protein accession | YP_001158115 |
Protein GI | 145593818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.929061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACG ACCACGACGG AACCCGCTGT GTCCATGCCG GGCTGCCGGA GCCCGCACCC GGGGAGCCGT TCCTGCCCGG CCCGGTCTTT GCCGCGCCGT ACCACCTCGA TCCGTGGGCC GGGCCGGCGG GCACGCCGAA CGGCTACGGT CGGTCGGACA ACCCGACCCG GCGGCGGCTG GAGGCGGCGA TCGGTGAGCT GGAGGGGGGC GACTGCCGGG CTTTCGCCAG CGGCCAGGCG GCGATCACTG GGCTGCTGCT GAGTGTGTTG CGCTCCGGCG ACACGGTGCT GCTCCCTGCC GACGGCTACT TTCCGGTGCG GGCGTTCGCC ACCGAGACTC TGGCCGGCAT CGGGGTACGG GTGCTCTTCG CGCCGACCGC CGGGCCATAC CCGGACCTCG CCGGCGTACG TCTGGTGTTG GTGGAGACCC CGGCGAACCC GGGCCTGGAC GTCGTCGACC TGCCCGTGTT GGCGGCGCGG GCGCGGGCGG CTGGGGCCCT GCTGGTGGTG GACAACACCA CCGCGACTCC GCTCGGGCAG CGTCCGTTGG AACTCGGTGC CGACCTGGTG GTGGCCTCCG GCACGAAGGC GCTTACCGGC CACTCGGACC TGCTGCTCGG CTATGTCGGC ACCCGGTCGG CCGAGTTGCT CGCGGCGGTG ACCCGGTGGC GGGACCACAC CGGGGCGGTC CCGGGCGCCT TCGACGCCTG GCTGGCGCAC CGATCCCTGG CCACCCTCGA CCTGCGACTG GCCCGGCAGA CCGCGAACGC CGCGGCCCTC GCCGAGTTGC TGGCGGAGCA ACCGGGAGTG ACCGGGCTGC GCTGGCCGGG CCGGCCGGAG GATCCGGCCT ACCCGGTGGC CGTGGCGCAA CTGCGCCGGA TGCCGGGGGT ACTCTCCTTT GATCTTGGCG ACGCCGACCG CGTCGCCCGC TTCGTCGCCG CGGCCCGGCT GGTGGCGGCG GCCACCTCGT TCGGCGGGCT GCACACCACG GCTGACCGGC GGGCCCAGTG GGGTGACGAC ACCCCGCCCG GCTTCGTCCG ACTCTCCTGC GGCGTCGAGG ACACCACCGA CCTGGTCGCC GACGTGGCTG CCGCGCTGCG GGTCGTCGGC GGCTGA
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Protein sequence | MTDDHDGTRC VHAGLPEPAP GEPFLPGPVF AAPYHLDPWA GPAGTPNGYG RSDNPTRRRL EAAIGELEGG DCRAFASGQA AITGLLLSVL RSGDTVLLPA DGYFPVRAFA TETLAGIGVR VLFAPTAGPY PDLAGVRLVL VETPANPGLD VVDLPVLAAR ARAAGALLVV DNTTATPLGQ RPLELGADLV VASGTKALTG HSDLLLGYVG TRSAELLAAV TRWRDHTGAV PGAFDAWLAH RSLATLDLRL ARQTANAAAL AELLAEQPGV TGLRWPGRPE DPAYPVAVAQ LRRMPGVLSF DLGDADRVAR FVAAARLVAA ATSFGGLHTT ADRRAQWGDD TPPGFVRLSC GVEDTTDLVA DVAAALRVVG G
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