Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1259 |
Symbol | leuD |
ID | 5057712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1421669 |
End bp | 1422256 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640473531 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_001158107 |
Protein GI | 145593810 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0512287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.692541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGT TCACTATCCA CACCGGTACC GCCGTGCCGC TACGTCTTTC TAATGTAGAT ACTGATCAGA TTATCCCGGC TGTGCACCTA AAGCGGGTAA CGCGAACGGG TTTCGCGGAT GCCCTGTTCA GTTCGTGGCG GGAGGATCAG GCGTTTGTCC TCAACGATGA ATCATATTCG GGTGCCTCGA TTCTTGTTGC TGGCCCCGAG TTCGGTACCG GTTCCTCCCG AGAGCACGCC GTCTGGGCCT TGCGAGACTG GGGGTTCCGG GTCGTGATCG CCCCGCGCTT CGGTGACATC TTCCGGGGTA ACGCGCTCAA GGGAGGACTG CTGCCGGTTG AGTTGGAATT GAAAGCAATC GAAGAGATCT GGGGTCGCAT CGAGGCCGAT CCGAGCACGT CGATCACCGT CGACCTCGCC GCCCGTCAGG TTCAGGTCGG GGGTGTGAAC TGGGGGTTCC CGCTCGACGA GTTCAGCCGC TGGCGGCTGA TGGAGGGCTT GGACGACATT GGACTCACGC TTCGGCACGA ACCCCTGATC GGTGCCTTCG AGGCGTCTCG GCAGCCGTTC CTACCGACCA TCGCGTAG
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Protein sequence | MEKFTIHTGT AVPLRLSNVD TDQIIPAVHL KRVTRTGFAD ALFSSWREDQ AFVLNDESYS GASILVAGPE FGTGSSREHA VWALRDWGFR VVIAPRFGDI FRGNALKGGL LPVELELKAI EEIWGRIEAD PSTSITVDLA ARQVQVGGVN WGFPLDEFSR WRLMEGLDDI GLTLRHEPLI GAFEASRQPF LPTIA
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