Gene Strop_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1249 
Symbol 
ID5057699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1411586 
End bp1411975 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content75% 
IMG OID640473518 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001158097 
Protein GI145593800 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.459871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAAG CCGAGCTGCG GGAACGCTTC TCCCGGTCGT CCGGGCCCGG CGGTCAGGGG 
GTCAACACGA CCGACTCGCG GGTCGAGCTG AGTTTCGATC TGGCTGCCTC ACCGGGCCTC
CCGGAGTCGC TGCGGGCCCG GGCCCTCGAC CGCCTCGCCG GGCGAATCGT CAACGGCGTC
CTCACCGTGA CCGCCAGCGA GCACCGCGCC CAACTCGCCA ACCGGGAGGC CGCCCGGGAG
CGGATGGCCG CGCTGCTCCG CGCGGCGATC GCACCGCCGC CGAAGCGTCG TCGCCCGACC
CGGCCCTCCC GCGCCGCCAA GGAGCGTCGA CTGACCGAGA AGAAGCGGCG GTCCCAGCGC
AAGCGCGACC GCCGCGTCGA CGGCGACTGA
 
Protein sequence
MPEAELRERF SRSSGPGGQG VNTTDSRVEL SFDLAASPGL PESLRARALD RLAGRIVNGV 
LTVTASEHRA QLANREAARE RMAALLRAAI APPPKRRRPT RPSRAAKERR LTEKKRRSQR
KRDRRVDGD