Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1224 |
Symbol | |
ID | 5057674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1382907 |
End bp | 1384103 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473493 |
Product | hypothetical protein |
Protein accession | YP_001158072 |
Protein GI | 145593775 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.303019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.552765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGTC GGCCGGCTAC GCTGGTCCGG GTGAGCGCCC GTCCCGCGCA CCCGCGCACC CTCCGCTTTC GGACCACCGT CGCGGCGTCG TGCGCGGCGC TGCTGGTCGT CACCGGTTGC AGCTTCGGCG AGCCCGCGCC CGACCCGGCC GGCGAGCCCC CCACGTTCCC CACCCCGACC AGCACCGAGC CGGGGAGTAC CGGGCCGGAG GTCGTCGCCA CCGTGCTGGC GAAGGACCTA CGAGCCCCGT GGGGCATCGC CTTCCTGCCG GATGGGGGCG CGCTGGTGAC CGAGCGGGAC ACCGGCCGAA TTCTCCAGGT CGGGCCCGAG TCCGACCCCG ACGGGCTACG GGTGACCGTC GTCCAGACCC TCGCCGAGGT GACGGCAGGC GGCGAGGGCG GGCTGATGGG GATCGCCGTC TCCCCGGACT ACCAGCGGGA CCAGACGGTC TTCGTCTACT ACACCGCCGA GCAGGACAAC CGCATTGCCC GGCTCACCCT CGGCGAGCCG CCACGCCCGA TCCTGACCGG CATCCCGAAG GCACGCACCC ACAATGGCGG CGGCCTCGCC TTCGGCCCGG ACGGGCAGCT CTACGCCAGC ACCGGCGACG CCGGCGACCG GGAACAGGCG CAGGATGGCA ACCGACTCGG TGGAAAGATT CTGCGGATCA CCACCGACGG TGAGCCGGCA CCGGACAACC CCTTCCCCGA CTCGCCCGTC TGGTCGCTGG GGCACCGGAA CGTGCAGGGC CTCACCTGGG CCGCCGACGG CCGGATGTAC GCCGTCGAGT TCGGCCAGAA CACCTGGGAC GAGATCAACG AAATCGAGCC GGGAGGCAAC TACGGGTGGC CGGAGGTCGA GGGCCGCTCC GACGACAGCC GATACGTCAA CCCGATCGTC TGGTGGCCGC CGGCGGACGC CTCCTGCTCC GGGCTGGCCC GGACCGAGCA TCTCCTCGCC ACGGCCTGCC TGCGCGGACA GCGGCTCTGG CTGGTCGAGT TGACCGACGC CGGAACGCTC GGCCAACCAC GCGACCTACT CACCAACCAG TACGGCCGAT TGCGGGCAGT CGCCACGGCA CCGGACGGCT CGCTCTGGGT GAGCACCTCG AACCACGACG GGCGCGGAGA TCCGGTGGCG GAGGACGACC GTCTCCTACG CCTGGTGTTC GCGGACGGCG AAGCCGGACG AAGCTGA
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Protein sequence | MACRPATLVR VSARPAHPRT LRFRTTVAAS CAALLVVTGC SFGEPAPDPA GEPPTFPTPT STEPGSTGPE VVATVLAKDL RAPWGIAFLP DGGALVTERD TGRILQVGPE SDPDGLRVTV VQTLAEVTAG GEGGLMGIAV SPDYQRDQTV FVYYTAEQDN RIARLTLGEP PRPILTGIPK ARTHNGGGLA FGPDGQLYAS TGDAGDREQA QDGNRLGGKI LRITTDGEPA PDNPFPDSPV WSLGHRNVQG LTWAADGRMY AVEFGQNTWD EINEIEPGGN YGWPEVEGRS DDSRYVNPIV WWPPADASCS GLARTEHLLA TACLRGQRLW LVELTDAGTL GQPRDLLTNQ YGRLRAVATA PDGSLWVSTS NHDGRGDPVA EDDRLLRLVF ADGEAGRS
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