Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1185 |
Symbol | |
ID | 5057635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1330942 |
End bp | 1332174 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473454 |
Product | hypothetical protein |
Protein accession | YP_001158033 |
Protein GI | 145593736 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3934] Endo-beta-mannanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACTA ATGCCCGTAC GCAGAGCACC CGAAGGTTCC GCCTCGGCGC CAACTACGTA CCGTCCGACG GCTGGTTCTA CAGCTGGCTC GACTTCTCGG CTGACGCGGC CCGCCGCGAC CTCGAAGACC TGGCGAGCAT CGGCCTGGAC CACGTACGCG TCTTCCCGGT ATGGCCATGG ATCCAACCCA ACCGCGCGCT CCTGCGTCAA CGACCAATCG ACGACCTGCT CACGTTGATC GACGTGGCGG CGGAGTTCGA TCTCGGTGTC GCGGTCGACC TGCTCCAGGG GCATCTGTCC AGCTTCGACT TCCTTCCCTC CTGGATACTC ACCTGGCACC AGAGCAGCAT CTTCACCGAC CGGACTGCAC GCGACGGCAT CAGTGAGTAC GTCCGGCGGA TCAGCACCGA GGTCGCGACG CGCCCCAACG TCTTCGCCAT CACCCTCGGC AACGAGGTCA ACAACCTCTG GCCCGCGAAC CCCACGACAC CCGCCGCCTC CCACCAGTGG GCGACGGAGC TACTCGATGT GGTCCGCGCC GCAGCGCCCG ACGCGCTCCA CCTACACTCC GTCTTCGACG ACGCGTGGTA CGCCCCCGAT CACCCCTTCC ACCCCGCCGA GGCGGTCGAG CTGGGCGACC TGACCACGGT GCACTCCTGG GTGTTCAACG GCACCTCGCG CATCGACGGG CCGCTCGGTC CGGCCACCAC CTCCCACGCC GACTACCTGC TGGAGCTCGC CGCCTCGAGC GCCCCGGACG CGAACCGCCC GGTGTGGCTG CAGGAGGTCG GGGTGCCCCG ACCGGACGTA CCTGCGGAGC AGGCCGGCGA ATTCGTCGCG CGCACCCTGG CGACGGTGGC CGGCAACCCG GCGCTGTGGG GCGTCACCTG GTGGGCATCG CACGACATCG ATCGTCGCCT CACCGACTTC CCGGACCGGG AATACGATCT GGGCCTGTTC ACCGTCGACC ACCGACCGAA GCCGGCCGCG CTCGCCCTGG CCGAGTTCGC CCGCGACACC GCGGCCCATG CTGCGGCCCG GGTTCGGCCA GCACTGGTGG CGCCGATCAA CCCGCTCCGG GAGCCCACGC GGCGGGCGGA GATCGCACCA GGGAGCGCAT TCCACCAGGA GTGGGTGAAG GCCCGTCAGA CCGAACCCAC CGCGATCGTC ACCCCAGACC GGGCGACCGA CGAGGGCTAC CTCGCCGCCC GGGGCCTCGG CCCGCTCCGC TGA
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Protein sequence | MITNARTQST RRFRLGANYV PSDGWFYSWL DFSADAARRD LEDLASIGLD HVRVFPVWPW IQPNRALLRQ RPIDDLLTLI DVAAEFDLGV AVDLLQGHLS SFDFLPSWIL TWHQSSIFTD RTARDGISEY VRRISTEVAT RPNVFAITLG NEVNNLWPAN PTTPAASHQW ATELLDVVRA AAPDALHLHS VFDDAWYAPD HPFHPAEAVE LGDLTTVHSW VFNGTSRIDG PLGPATTSHA DYLLELAASS APDANRPVWL QEVGVPRPDV PAEQAGEFVA RTLATVAGNP ALWGVTWWAS HDIDRRLTDF PDREYDLGLF TVDHRPKPAA LALAEFARDT AAHAAARVRP ALVAPINPLR EPTRRAEIAP GSAFHQEWVK ARQTEPTAIV TPDRATDEGY LAARGLGPLR
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