Gene Strop_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1166 
Symbol 
ID5057616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1306371 
End bp1307372 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID640473435 
Productalcohol dehydrogenase 
Protein accessionYP_001158014 
Protein GI145593717 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGCAT ACGTACAGAC CAAGTACGGC GACCCGAGCG TCATGCGACT CATGGACGTG 
CCCACGCCCA CGCCCGAGCA CGGTGAGGTG CTGATTCGGG TACGGGCAGC AGGCCTCAAT
CCGGTGGACT ACCACATCCG GGACGGCAAG ATGCGGATGA TCGCCCGGAT GAAACTGCCG
AAGGTGGCCG GCAGCGAGCT GGCGGGCGTG GTGGAAGCCG TCGGGCCCGG CGTCACCGGC
CTCGCCGTCG GGGACCGGGT GTTCACCCGC GTCGACGTCA TGAAGCTGGG CGCCTTCGCC
CCCCATGCGG TTGTCGCGGC GGACCTCGTC GCCCCGATGC CGCAGTCGCT GGACTTCACC
GAGGCCGCCG GGCTTCCCCT GGCCGGCCTC ACCGCGCTAC AGGCCCTGCG GGACGAGCTC
ACCATCGAAA AGGGCCAACG GATCTTCATC TCCGGCGGTG CGGGTGGCGT GGGCACACTC
GCCATCCAAC TCGCGGCATG GATGGGCGCC CAGGTCGCCA CGACCGCCTC GCCCGGGGGT
GAGAATCTGG TGCGGTCACT CGGTGCTGAG ACGGTCATCA ACTACCAGAC GACCAGCTTC
GCAGACGTTT TGCGGGACTA CGACGCGGTT CTCGACCTCC GGGGTGGTCA GGATCTGGCG
GACAGTTTCG CCATTGTCCG TCCCGGAGCC AAGGTGGTGT CCGTCGCGGG AGTGCCCGAA
CGGAACTCAG CCAAGGACCT GGGCGCCGGT CCACTGGTCG GTGCCCTGTT CAACCTGCTC
AGTGGCAAGG TCCGGCGGCA GGCCAAGGCG CACGGGGTCA CCTACCGGTA TCTGTTCATG
CACCCTAGCG GTGCCGATCT GCGAATTCTG GCCGACCTCG TCGACGGTGG GAACCTGAAG
GTGGTGACGG ACCAGGTCTT CCCCTTCGAG GAGATCGCGG ACGCCTTCGC CCGCCTCGAG
CGTGGCCACG CCAAGGGAAA GATCATCGTT GCGATGCCCT GA
 
Protein sequence
MQAYVQTKYG DPSVMRLMDV PTPTPEHGEV LIRVRAAGLN PVDYHIRDGK MRMIARMKLP 
KVAGSELAGV VEAVGPGVTG LAVGDRVFTR VDVMKLGAFA PHAVVAADLV APMPQSLDFT
EAAGLPLAGL TALQALRDEL TIEKGQRIFI SGGAGGVGTL AIQLAAWMGA QVATTASPGG
ENLVRSLGAE TVINYQTTSF ADVLRDYDAV LDLRGGQDLA DSFAIVRPGA KVVSVAGVPE
RNSAKDLGAG PLVGALFNLL SGKVRRQAKA HGVTYRYLFM HPSGADLRIL ADLVDGGNLK
VVTDQVFPFE EIADAFARLE RGHAKGKIIV AMP