Gene Strop_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1129 
Symbol 
ID5057579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1274462 
End bp1275004 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID640473399 
ProductNUDIX hydrolase 
Protein accessionYP_001157978 
Protein GI145593681 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATGCC AGCCGGTCGG CACCATGGAT CAATCGGGTG CGCCGCTGTC CGGTGGCGGG 
GCCCGGGCGT GGTTAGGGTC GGTTGTGCGG CGGATCGTGC GTAGGTCGGT GCGGGCCATC
CTTGTTGATG GTGACGGCCG TCTTGTGCTG ATCAAGCGGA TCAGGCCCGG GCAGGTGCCG
TACTGGACGA CGCCGGGCGG TGGGGTGGAG TCGACGGATG TTTGTCTGGA GGCCGCGCTG
CGTCGTGAGT TGCGTGAGGA GGTTGGTGGC GAGGCCGGTC GGCTGGTTCC GGTGTTCCTG
TTCTCCACTC CGGTTGGTGC GGGTGTTTCG GTGCAGCATT TCTTCGCGGG TCGTTTGCTT
CGGTTGCGGG TGGAGGCGCG TAGTGGGCCG GAGTTCGCTG ATCCCGCGCG GGGTGAGTAT
CAGCTGGACC GGGTGGCGAT TGACGAGCTG CACGCGGTGG AGTTGAAGCC GGATGTGCTC
AGGGTGTTCA TTGCCGCCCA CGAGGAGGCG TTGCTCTCGG TGTACGACGA TGGTGCAGGG
TAG
 
Protein sequence
MGCQPVGTMD QSGAPLSGGG ARAWLGSVVR RIVRRSVRAI LVDGDGRLVL IKRIRPGQVP 
YWTTPGGGVE STDVCLEAAL RRELREEVGG EAGRLVPVFL FSTPVGAGVS VQHFFAGRLL
RLRVEARSGP EFADPARGEY QLDRVAIDEL HAVELKPDVL RVFIAAHEEA LLSVYDDGAG