Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1129 |
Symbol | |
ID | 5057579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1274462 |
End bp | 1275004 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640473399 |
Product | NUDIX hydrolase |
Protein accession | YP_001157978 |
Protein GI | 145593681 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGATGCC AGCCGGTCGG CACCATGGAT CAATCGGGTG CGCCGCTGTC CGGTGGCGGG GCCCGGGCGT GGTTAGGGTC GGTTGTGCGG CGGATCGTGC GTAGGTCGGT GCGGGCCATC CTTGTTGATG GTGACGGCCG TCTTGTGCTG ATCAAGCGGA TCAGGCCCGG GCAGGTGCCG TACTGGACGA CGCCGGGCGG TGGGGTGGAG TCGACGGATG TTTGTCTGGA GGCCGCGCTG CGTCGTGAGT TGCGTGAGGA GGTTGGTGGC GAGGCCGGTC GGCTGGTTCC GGTGTTCCTG TTCTCCACTC CGGTTGGTGC GGGTGTTTCG GTGCAGCATT TCTTCGCGGG TCGTTTGCTT CGGTTGCGGG TGGAGGCGCG TAGTGGGCCG GAGTTCGCTG ATCCCGCGCG GGGTGAGTAT CAGCTGGACC GGGTGGCGAT TGACGAGCTG CACGCGGTGG AGTTGAAGCC GGATGTGCTC AGGGTGTTCA TTGCCGCCCA CGAGGAGGCG TTGCTCTCGG TGTACGACGA TGGTGCAGGG TAG
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Protein sequence | MGCQPVGTMD QSGAPLSGGG ARAWLGSVVR RIVRRSVRAI LVDGDGRLVL IKRIRPGQVP YWTTPGGGVE STDVCLEAAL RRELREEVGG EAGRLVPVFL FSTPVGAGVS VQHFFAGRLL RLRVEARSGP EFADPARGEY QLDRVAIDEL HAVELKPDVL RVFIAAHEEA LLSVYDDGAG
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