Gene Strop_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1084 
Symbol 
ID5057531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1230002 
End bp1230322 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID640473351 
Producthypothetical protein 
Protein accessionYP_001157933 
Protein GI145593636 
COG category[S] Function unknown 
COG ID[COG4274] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.307072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.734607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGT ACCTCTTCCA AGCGACCTAC ACCACGCAGG GAGTGGCAGG ACTGAGTGAC 
AAGGGTGGAA CAGCACGGGC CGAGGTGGTC CGGGCGATGA TCGAGAACGC TGGCGGGCGG
GTGGAGTCGC TGTACTTCGG GATCGGCCAC CATGACCTCT TCGTCTCCTG CGAGATACCG
GACAACATGA CCACCGCCGC GCTCGGCATC GCCGCCATAT CGACGGGTGG AGTGAGAGCG
GAGGTCATTC CGCTGATTAC GCCAGAGGAG ATCGACGAAG CAGCTCAGAC GCCGGTCACC
TACCAGGCAG CGGGCAAATA G
 
Protein sequence
MPKYLFQATY TTQGVAGLSD KGGTARAEVV RAMIENAGGR VESLYFGIGH HDLFVSCEIP 
DNMTTAALGI AAISTGGVRA EVIPLITPEE IDEAAQTPVT YQAAGK