Gene Strop_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1012 
Symbol 
ID5057458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1140547 
End bp1141836 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID640473282 
Productmethyltransferase type 11 
Protein accessionYP_001157865 
Protein GI145593568 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.878034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC AGTCGTCCCT CATCTCCCTG GAGGGATCGC AGTGGGGTGC AACCGGGGTG 
GGGTTGCAGC CCCGGCCAGT CGCTCATCAT CCCTGGAGGG ATCGCATCGC AGCAGTCCCA
TCGGGTCATC TTGTGCTTGC CCCTCACGTA GCGGCATGTC ACATAGTCGA TGTCGTGGAG
GATCACCTGA CTGTGGGGCA AGCGGCCGGG CTGGCTGGCG TAACCGTCCG CGCACTGCAT
CACTACGACG AGATCGGCCT CCTGCGGCCG TCCACGCGGA CCGTGGCGGG ACACCGGGCC
TACTCGGCGG GCGACGTGGA GCGACTGCGG GAGGTGCTCG CGTACCGGAG GCTCGGTTTC
GGGCTGCGGG AGATCGCGGA CCTGGTCAAC GATCCGACCA CCGACGCGGT CGCGCACCTG
CGTCGGCTGC GTGGGCTGCT GCTGGACCAA CGCGACCGCG CCGCCGCCAC GGTGACGGCC
ATTGACCGGG AATTGGAGGC ACGGGCAATG GGAGTCAGGA CGACGCCAGC GGAACAGTTG
AAAGTGTTCG GTGCGCAGTT GTACGACACG ATCGGATCCG CCTATCCAAC GACGCGGCGT
ACCGAGCCAC GGATCGCCGC CCGGATCTGG GATGCACTGG GAGACGCCCG TACGGTGCTG
AACGTTGGGG CTGGCACCGG TTCCTACGAA CCTCACGACC GGGAGGTCAC GGCGGTGGAG
CCCTCGGGGG TCATGCGGGC CCAGCGTCCC GTGGGCGCGG CGCCCTGCGT GGCCGCCGCC
GCGGAGAGTC TGCCGTTCGA GGACCAGTCG TTCGACGCCG CGATGGCGGT CAGCACCGTG
CATCACTGGC GAGATCCGGT CGCCGGCCTG CGGGAGATGC GGCGGGTCGC GCGTCGCGTG
GTGGTGTTCA CGTACGACGC TGAGGACACC GGCTGGGGCC AGCGATTCTG GCTCACCCGC
GACTACCTAC CCGAGTTCGC GGAGCTGCTC GTCAACTGGC CGTCCCTCGC CGACCTGACC
CACGCGATCG GAGGACGCGC GGAGCCGGTA CTCGTACCGT GGGACTGCGT GGACGGCTTC
TTCGAGGCGC ACTGGCGCCG GCCCGCGGCG TACCTGGACG AACACGTACG CCGGGCGGTG
TCGGTCTGGA CCAGAGTGGG GGCGCAGGCG GAACAACGGG CGGTCCGGTC GCTTCGCGAA
GACCTGTCAT CCGGCCGGTG GGCCGAGCGA AACCGGGACC TCGTCGCCCT CGACACGGCC
GAGCTCGGCC TCCGACTGCT CGTGGCATGA
 
Protein sequence
MTPQSSLISL EGSQWGATGV GLQPRPVAHH PWRDRIAAVP SGHLVLAPHV AACHIVDVVE 
DHLTVGQAAG LAGVTVRALH HYDEIGLLRP STRTVAGHRA YSAGDVERLR EVLAYRRLGF
GLREIADLVN DPTTDAVAHL RRLRGLLLDQ RDRAAATVTA IDRELEARAM GVRTTPAEQL
KVFGAQLYDT IGSAYPTTRR TEPRIAARIW DALGDARTVL NVGAGTGSYE PHDREVTAVE
PSGVMRAQRP VGAAPCVAAA AESLPFEDQS FDAAMAVSTV HHWRDPVAGL REMRRVARRV
VVFTYDAEDT GWGQRFWLTR DYLPEFAELL VNWPSLADLT HAIGGRAEPV LVPWDCVDGF
FEAHWRRPAA YLDEHVRRAV SVWTRVGAQA EQRAVRSLRE DLSSGRWAER NRDLVALDTA
ELGLRLLVA