Gene Strop_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0944 
Symbol 
ID5057388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1059564 
End bp1060520 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content71% 
IMG OID640473214 
ProductLPPG:FO 2-phospho-L-lactate transferase 
Protein accessionYP_001157799 
Protein GI145593502 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01819] LPPG:FO 2-phospho-L-lactate transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.964955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA TGCGCATCGT GGTTCTGACC GGAGGAATCG GCGGCGCCCG GTTCCTGCTC 
GGGGTGCGGG CTTACGCCCG CGCGATCGGC GCCGAGGTGA CCGCCGTGGT CAACGTGGGC
GACGACCTGT ATCTGCACGG CCTGAAGGTC TGCCCGGACC TGGACAGCGT CATGTACACG
TTGGGTGGTG GCGCCGATCC GGAACGTGGC TGGGGACGCG TTGCGGAGAG TTGGACGGTA
CGGGAGGAAC TGGCCGCGTA CGGGGCAGAG CCGGCCTGGT TTGGGCTGGG GGACCGAGAT
CTCGCCACCC ACCTGGTCCG CACCACCAGG ATCACTGCCG GCTACCCACT GCACCAGGTC
ACCGCCGCAC TGGCCACCCG CTGGGAGCCC GGCGTACGCC TGCTACCGGC GACCGACGAC
CGCCTGGAGA CCCACGCGGT GGTCGACCTC GACGGCCGCC AGCGGGCGAT TCACTTCCAG
GAGTGGTGGA TTCGGCATCG GGCCGAGATT CCCACGCACC GGTTCGTCTT CGTCGGCGCG
GAGGACGCGA AGCCGGCACC GGGCGTGACC GAGGCGATCA CTGAGGCGGA CCTGGTGCTG
CTCGCACCGA GCAACCCGGT GGTGAGCATC GCCCCGATCC TGGCCGTGCC CGGATTGCGG
GACGCGGTCA CGGCGGGCAA GGCCCCGGTG GTCGGGGTGT CCCCGATCAT CGGCGCCGCC
CCGGTCCGTG GGATGGCCGA CCGGTGCCTG AACGTGCTCG GCATCGAGTG CAGCGCCGCC
GGAGTGGGCG GTCTCTATGG TGGGCGGGCC AGCGGTGGTC TGCTCGACGG CTGGCTGGTA
GCCGAGGAAG ACGCGGCGAC GGTGGTGCCG GAGGTGCGGG TCCACGCGGC ACCGCTGCGG
ATGACGGACG AGGCGGCGAC CACGGCGATG GTCCACGCCG CGGTGGGGTT GATGTGA
 
Protein sequence
MDGMRIVVLT GGIGGARFLL GVRAYARAIG AEVTAVVNVG DDLYLHGLKV CPDLDSVMYT 
LGGGADPERG WGRVAESWTV REELAAYGAE PAWFGLGDRD LATHLVRTTR ITAGYPLHQV
TAALATRWEP GVRLLPATDD RLETHAVVDL DGRQRAIHFQ EWWIRHRAEI PTHRFVFVGA
EDAKPAPGVT EAITEADLVL LAPSNPVVSI APILAVPGLR DAVTAGKAPV VGVSPIIGAA
PVRGMADRCL NVLGIECSAA GVGGLYGGRA SGGLLDGWLV AEEDAATVVP EVRVHAAPLR
MTDEAATTAM VHAAVGLM