Gene Strop_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0749 
Symbol 
ID5057191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp831314 
End bp831862 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID640473017 
Productphage integrase family protein 
Protein accessionYP_001157604 
Protein GI145593307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.68292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG TGATCGCCGC CGTCGAAGGC GTCCGCTCGG CGATCCGTCA ATGGCAACAG 
CCCACGCCCG GTAAACCGGG ACCTCGGCAC ACCGGCGACC TGGCCGACAT CGTCGACCTC
ATGCTCGCCA CCGGCGCCCG CATCGGCGAG ATCCTGGCCG TGCGGTGGGA AGAGGCGGAC
CTCGCCGCCG AACACCCGAC CCTAACCATC TGCGGCACCA TCGTTTACCT CAAGGGCAAG
GGATTCTTCC GACAGGAGTG GACCAAGAGC GACGCCGGCT ATCGGGCCGT CATTCTGCCC
CGCTTCGCGG TTGGGATGCT GCTGGCCCGC AAGCTCACCG CCGCCGACGA CCCTCACGAT
TCGATCTTCG CCTCCCGGCG CGGCACCTGG ATGTCCCCGC ACAACGTGCG CCGGCAGTGG
CGCCAAGCCC GCGCCGACAC CAGCCCTCGA ATGGGTCACC CCACACACCT TCCGCAAGAC
GGTCGCCACC CTCATCGACA AAGAGGCCCA CACCGACCAG GCTGCTGCCC AGCTCGGGCA
CGGCAGTAA
 
Protein sequence
MATVIAAVEG VRSAIRQWQQ PTPGKPGPRH TGDLADIVDL MLATGARIGE ILAVRWEEAD 
LAAEHPTLTI CGTIVYLKGK GFFRQEWTKS DAGYRAVILP RFAVGMLLAR KLTAADDPHD
SIFASRRGTW MSPHNVRRQW RQARADTSPR MGHPTHLPQD GRHPHRQRGP HRPGCCPARA
RQ