| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0708 |
|---|
| Symbol | |
|---|
| ID | 5057149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 793318 |
|---|
| End bp | 794136 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640472975 |
|---|
| Product | PaaX family transcriptional regulator |
|---|
| Protein accession | YP_001157563 |
|---|
| Protein GI | 145593266 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.719013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.640912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAC GGTCGGCACT CTTCGACCTG TACGGTGACC ACCTCCGGCC CCGAGGTGGC
CGGGCGCAGG TCGCTGCCCT GGTCAAGCTG CTGGCACCAC TGGGCATCGC ACCGCCAGCA
GTACGGACGG CGGTCTCCCG GATGGTGCGC CAGGGCTGGC TCGAACCCCT CCGGATGGCC
ACCGGACCCG GTTACTCGAT CACCCCGAAA GCCGCACGCC GGTTGGACGA GGCGGCCACG
CGGATCTACC GCACCGGCAA AACCGGCTGG GACGGGCGCT TCGACCTGCT CGTCGTGGCG
GCACCGGCCG CCCGCCGGGA ACGGCAGCGC CTCGCCGCGA ACCTGAGCTT CCTCGGCTAC
GGCATGCTCG ACGAGTGCAC GTGGGTGGCC ACCCGACCGG GCGAGGACGT TGACCTGCTC
CTCGACGAAG CGGGGGTGCG CTACGAGCGG TTCACCGCGG CGCACGCGGC CGGCACGCCG
GGAGCGATGG GCGTCGTCCG CCGCGCCTGG GACCTGGCCG AGATCGGCCA GGCATACGAA
CAATTCGTCG CCGAGCAGCG GGCGCTGCTT GCCGGGGTCA CCGTACGCAG TCCCGACGAA
GAGGCGTACG CCGCCCGATT CCGGCTCGTA CACGCCTGGC GTACCTTCCT GTTCCGGGAC
CCGCAGCTGC CGCCGGCGCT GCTACCCGAG CGCTGGCCGG GCACCGCCGC GGGCAGCTTC
TTCGACCGCC ACGCGGCCCG GCTGCGGCCG GCCGCCGACC GCTACGTCGA GGCCTGTCTC
GACGCCGGTT ACCGCATCAT TGGACAGAAG GGTCATTGA
|
|---|
| Protein sequence | MQARSALFDL YGDHLRPRGG RAQVAALVKL LAPLGIAPPA VRTAVSRMVR QGWLEPLRMA
TGPGYSITPK AARRLDEAAT RIYRTGKTGW DGRFDLLVVA APAARRERQR LAANLSFLGY
GMLDECTWVA TRPGEDVDLL LDEAGVRYER FTAAHAAGTP GAMGVVRRAW DLAEIGQAYE
QFVAEQRALL AGVTVRSPDE EAYAARFRLV HAWRTFLFRD PQLPPALLPE RWPGTAAGSF
FDRHAARLRP AADRYVEACL DAGYRIIGQK GH
|
|---|
| |