| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0705 |
|---|
| Symbol | |
|---|
| ID | 5057146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 791304 |
|---|
| End bp | 791867 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640472972 |
|---|
| Product | DNA-3-methyladenine glycosylase I |
|---|
| Protein accession | YP_001157560 |
|---|
| Protein GI | 145593263 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.054596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.395728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGGTG CTGACGGGTC ATCCCGCTGT GCCTGGGGCG CGGGCACACC CGACTATGCC
GTCTACCACG ACACCGAGTG GGGTCGCCCG CTGCATGGCG ACGACGCCCT CTATGAGCGG
ATGACGCTGG AGGCGTTCCA GTCCGGGCTG TCGTGGCTGA CCATCCTGCG GAAGCGGGCT
GCGTTCCGGG AGGCGTTCGA CGGGTTCCGG ATCGAGTCGG TAGCAGCCTT CTCCGGGGCG
GATGTGGCCC GGCTCCTCGA CGACACCGGC ATCGTCCGCA ACCGGGCCAA GATCGAGGCG
GCGATCTCCA ACGCGCGGGT CGCGCTGGAA CTTCCGGTCG GGCTCTCCGC CCTGCTCTGG
TCGTTCGCGC CGCCACCCCG GCGCGCCCGG CCGGCCTCGT TCGCGCAGGT GCCGGCGCTG
ACGGCGGAGT CCACCACGAT GGCGAAGGCG CTGAAGAAGC GGGGCTTCAG GTTCGTCGGC
CCGACCACGG CATACGCGCT GATGCAGGCC ACCGGCATGG TCGACGACCA TCTCGTCGGC
TGCCACGTGG CCGGCTTTCG ATGA
|
|---|
| Protein sequence | MIGADGSSRC AWGAGTPDYA VYHDTEWGRP LHGDDALYER MTLEAFQSGL SWLTILRKRA
AFREAFDGFR IESVAAFSGA DVARLLDDTG IVRNRAKIEA AISNARVALE LPVGLSALLW
SFAPPPRRAR PASFAQVPAL TAESTTMAKA LKKRGFRFVG PTTAYALMQA TGMVDDHLVG
CHVAGFR
|
|---|
| |