Gene Strop_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0648 
Symbol 
ID5057089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp730082 
End bp731002 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID640472916 
Producthypothetical protein 
Protein accessionYP_001157504 
Protein GI145593207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGT TCAAGTGGCT GCGTCAGGCT GACGTTGACG CGGGAGTCAA ACCGGGCGTC 
AGCGGCGTCG TCAGCCGAGC TGCGCGAGGC CCGCAAACGG ATCCGCTTGC TGGAGCAGGA
GAACGAGGTC CTGCGTCGGG CCGCGGCGTA TCTGTCGCAG GCGCATCTGC CGGGAAAGGG
CGCTATTCGC TCGTGAGCGA GCTGGCCGCC GACGGGATCC CCGTCGCGGT GACGTGCCGG
GTATTGAACA TCGCTCGTCA GCCCTACTAT CGGTGGCTCG GCCGGCCCGT CGGTGACGCC
GAAATCGTCG CCGCTCATCG CGCGAACGCC CTGGTCGATG CCCACCGCGA TGACCCGGAG
TTCGGGTACC GGTTCCTGGT CGATGAGGCC CGCACCGCCG GCCAGGCGAT GGCGGAGCGC
ACCGGGTGGA AGATCTGCTC GGACAATGGT TGGCGGAGCG CCCTCGGTAA GCGCAAGAAG
CGCGGCAAGG GTGGCAAGGT CGGTCCACCG GTTCATGACG ACCTCGTGCA ACGGGACTTC
ACCACCGACG GCCCGAACCG GTTGTGGCTG GCCGACATCA CCGAACACCG CACCGGCGTA
CGACTGGCCC GACCCCTCGC CGTAGACCTA TGCCACCCAT GGGAACGACC AGCCCCCCGG
CTCACCCAGC CCGCGTCCGC CGCGGATTTC GGCACCTACG CGCCAACAGC CCCTGTCCCG
CCAGTGCACC GAAACCCACC CGACCAGGAC CCGGCCGCCC ACCAGGACGA CCCAACCGCC
ACCCCACCCG CCGCCACGAC GTCCACATCA TCACCAGCAG CAGCGCGACC GGGAGGACAA
CATCTCCCAA GAAGAAGTCG ACCAATCCCC GGCCGGGCCG GCCCGGGTCG CTACGCCGCA
GTCGCACCGC GCACAGGTTA A
 
Protein sequence
MTLFKWLRQA DVDAGVKPGV SGVVSRAARG PQTDPLAGAG ERGPASGRGV SVAGASAGKG 
RYSLVSELAA DGIPVAVTCR VLNIARQPYY RWLGRPVGDA EIVAAHRANA LVDAHRDDPE
FGYRFLVDEA RTAGQAMAER TGWKICSDNG WRSALGKRKK RGKGGKVGPP VHDDLVQRDF
TTDGPNRLWL ADITEHRTGV RLARPLAVDL CHPWERPAPR LTQPASAADF GTYAPTAPVP
PVHRNPPDQD PAAHQDDPTA TPPAATTSTS SPAAARPGGQ HLPRRSRPIP GRAGPGRYAA
VAPRTG