Gene Strop_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0496 
Symbol 
ID5056935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp574702 
End bp575565 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID640472769 
Productregulatory protein, IclR 
Protein accessionYP_001157359 
Protein GI145593062 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTA GGAAACATGA GGAGGCAGGT CAACGAACCC CGGTCGACAA TGCCGAACAC 
TGTTGCGTTG GCCCCGAACG CTTTAGCATC CGCCCCATGC CGGGTCAGGT GCAGTCCATC
GCGCGTGCCG CGGCGATCCT CCGCCTGCTG GCCAGCAGTT CCGGCCGGCT CGGCATCGGG
GATATCGCCC GTTCTCTCAA CCTGCCCAAG GGCACGGCGC ACGGCATCAT ACGTACGCTG
CAATACGTCG GATTCGTGGA GCAGGACAAG ACCTCCGGCA AGTACCAACT CGGCGCCGCG
TTGCTGCACC TCGGCACGAG CTCCCTCGAC GTCAACGAGC TCCGTTCCCG TTCCATCAAC
TGGGCGGACC CCCTCGCCGC GCGCAGCGGC GAGGCGGTCC GTGTCGGCAC TCTGCTGGAC
GGCAAGGTAC TCGTGGTCCA CCACGTGTTC CGGCCCGACG ACACCCTCCA GACGCTGGAC
GTCGGATCCC TGCTGCCCCC GCACGCCACC GCACTCGGCA AAGTCCTGCT CGCCTACGAC
GTGGGCGCCG CCAACGCGGT CAAGCAACGC GAGCCCGAGC CCTACACCCG ACGCACCCTG
GTCACTGCCC GAGCACTCAC CCGGGCCCTC AGCGAAGTCC GGGACAACGG TTGGGGAGCC
GAAGTCGGAG AGATGACCCC TGGCGAGGCC GGCATCGCCG CGCCGATTCG CGGCTACGGC
GGCTTGGTCG TGGGCGCGAT CGGGCTCTCT GGTCCGGTGG ACCGCACCTG CGACGGGTCC
GGCAACCCCC GCCCAGCCCT CGTCACGTAC GTCCGCGACG CCGCCCGCGC GGTTTCCCGC
GATCTCGGCG CCACGCGCTG GTGA
 
Protein sequence
MNRRKHEEAG QRTPVDNAEH CCVGPERFSI RPMPGQVQSI ARAAAILRLL ASSSGRLGIG 
DIARSLNLPK GTAHGIIRTL QYVGFVEQDK TSGKYQLGAA LLHLGTSSLD VNELRSRSIN
WADPLAARSG EAVRVGTLLD GKVLVVHHVF RPDDTLQTLD VGSLLPPHAT ALGKVLLAYD
VGAANAVKQR EPEPYTRRTL VTARALTRAL SEVRDNGWGA EVGEMTPGEA GIAAPIRGYG
GLVVGAIGLS GPVDRTCDGS GNPRPALVTY VRDAARAVSR DLGATRW