Gene Strop_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0450 
Symbol 
ID5056889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp513359 
End bp514150 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID640472723 
Productmethyltransferase type 12 
Protein accessionYP_001157313 
Protein GI145593016 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTATTT TCCACGGAAC TGTTGGCTTC TATCGGCAGT TCCGGCCGGA CATTCCGGAG 
ACAGTAGCCG ATGTGTTGGA CGGCGCGGTC CCCGCCGGTT CGCCACGGCG TCTGCTCGAC
ATCGGCACCG GCGTCGGCCT CGTGGTGGAG GCCCTGCGGG GCCGGTTCGA CGACATCATC
GCCATCGACC CGGACCCCGA GATGCTCACC GCGGCCGAGA ACGCACTCCG CCCGCGGCTA
CCCGACGACG CCCAGCTACG CCTGGAGGAG ACCACCGCGG AGGAGTTCAC CCCACCGGCC
GGGTGGCAGG CCGACCTGGT GACGATCTGC CGAACGTTCC ACTGGCTCGA CAAGGCGAGG
GTCCTGAACC AACTGGACGC ACAGGTCAGC CGGGACGGTG CTGTCGCGAT CTTCGCCGAC
AAGAGCTTCT GGGTTGCCCA CCACGACTGG GAGATGGAAG TCCGGGCGGT GATCCAGGAC
TTTCTCGGCG AGCAACGTCG GGCGGGTGAC GGCACGTTCC ACGAGCAACG GCGTCCGGAC
ATCCAGGTCC TGCGTAACTC GCCGTTCAGC CAGGTCGAGG AGTGCATCGT GCCGGTGCAT
CGGACCTGGA CCGCCACCAG CATCCTTGGT TACCTGCACT CCACCACGTT CGCCGAGCCG
GAACTCTTCG GCGACCGGCT CCATGAGTTC GACAACGCCG TACGTGCCGC CCTGGCCCGG
TGTAGCGACA CCGACACCTT CATCGAGGAG AACGAGTTCG TCATCCACCT TGGTTGGCGA
GATCGGGCAT GA
 
Protein sequence
MSIFHGTVGF YRQFRPDIPE TVADVLDGAV PAGSPRRLLD IGTGVGLVVE ALRGRFDDII 
AIDPDPEMLT AAENALRPRL PDDAQLRLEE TTAEEFTPPA GWQADLVTIC RTFHWLDKAR
VLNQLDAQVS RDGAVAIFAD KSFWVAHHDW EMEVRAVIQD FLGEQRRAGD GTFHEQRRPD
IQVLRNSPFS QVEECIVPVH RTWTATSILG YLHSTTFAEP ELFGDRLHEF DNAVRAALAR
CSDTDTFIEE NEFVIHLGWR DRA