Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0450 |
Symbol | |
ID | 5056889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 513359 |
End bp | 514150 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640472723 |
Product | methyltransferase type 12 |
Protein accession | YP_001157313 |
Protein GI | 145593016 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATTT TCCACGGAAC TGTTGGCTTC TATCGGCAGT TCCGGCCGGA CATTCCGGAG ACAGTAGCCG ATGTGTTGGA CGGCGCGGTC CCCGCCGGTT CGCCACGGCG TCTGCTCGAC ATCGGCACCG GCGTCGGCCT CGTGGTGGAG GCCCTGCGGG GCCGGTTCGA CGACATCATC GCCATCGACC CGGACCCCGA GATGCTCACC GCGGCCGAGA ACGCACTCCG CCCGCGGCTA CCCGACGACG CCCAGCTACG CCTGGAGGAG ACCACCGCGG AGGAGTTCAC CCCACCGGCC GGGTGGCAGG CCGACCTGGT GACGATCTGC CGAACGTTCC ACTGGCTCGA CAAGGCGAGG GTCCTGAACC AACTGGACGC ACAGGTCAGC CGGGACGGTG CTGTCGCGAT CTTCGCCGAC AAGAGCTTCT GGGTTGCCCA CCACGACTGG GAGATGGAAG TCCGGGCGGT GATCCAGGAC TTTCTCGGCG AGCAACGTCG GGCGGGTGAC GGCACGTTCC ACGAGCAACG GCGTCCGGAC ATCCAGGTCC TGCGTAACTC GCCGTTCAGC CAGGTCGAGG AGTGCATCGT GCCGGTGCAT CGGACCTGGA CCGCCACCAG CATCCTTGGT TACCTGCACT CCACCACGTT CGCCGAGCCG GAACTCTTCG GCGACCGGCT CCATGAGTTC GACAACGCCG TACGTGCCGC CCTGGCCCGG TGTAGCGACA CCGACACCTT CATCGAGGAG AACGAGTTCG TCATCCACCT TGGTTGGCGA GATCGGGCAT GA
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Protein sequence | MSIFHGTVGF YRQFRPDIPE TVADVLDGAV PAGSPRRLLD IGTGVGLVVE ALRGRFDDII AIDPDPEMLT AAENALRPRL PDDAQLRLEE TTAEEFTPPA GWQADLVTIC RTFHWLDKAR VLNQLDAQVS RDGAVAIFAD KSFWVAHHDW EMEVRAVIQD FLGEQRRAGD GTFHEQRRPD IQVLRNSPFS QVEECIVPVH RTWTATSILG YLHSTTFAEP ELFGDRLHEF DNAVRAALAR CSDTDTFIEE NEFVIHLGWR DRA
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