| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0357 |
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| Symbol | |
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| ID | 5056795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 408517 |
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| End bp | 409485 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472629 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001157220 |
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| Protein GI | 145592923 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCC CCCTACGCCT CGGTACCCGG GGCAGCGCTC TCGCGATGGC CCAGTCCGGG
CAGGTCGCGG AGGCCCTCAC CGCGGCCACC GGTACCCCGG TGGAGCTGGT CGAGGTGGTG
ACCACCGGTG ACCGTTCCAC GGCCCCGGTG CACCAGCTCG GTGTCGGCGT GTTCGTCTCC
GCGCTGCGGG ACGCCCTCGC CGCGGGTGCC ATCGACTTCG CGGTGCACTC GTACAAGGAC
CTGCCGACCG CGGCGGCCCC CGGCCTGTAC GTCGCCGCCG TTCCACCCCG GCAGGATCCC
CGGGACGCGC TCGTGGCCAC CGGCGGTCGT ACGCTCGCCG AGCTGCCGCC CGGCGCCCGG
GTCGGCACCG GTGCGCTGCG TCGCATCGCC CAGCTGCACG CGCTCGGGCT TCAGCTCGAA
GTCCAGCCGA TCCGGGGTAA CGTCGGTACC CGGCTGGCGC GGGTGCTCGG GCCGGAGGCC
GACCTGGACG CGGTGGTCCT GGCACGGGCC GGGCTGGCCC GGCTGGATCG CACCGACACG
ATCACCGAGA CGCTCGACCC GATGCTGATG CTGCCCGCTC CCGCCCAGGG GGCGCTGGCG
GTGGAGTGTC GGTCCGACGA CTCGGCACTG GTCGAGCTGC TCGCGGTACT CGACCACGCA
CCGTCCCGCG CCACGGTCGT CGCGGAGCGG GCGCTGCTCG CCACCCTGGA GGCCGGGTGC
AGTGCCCCGG TCGCCGCCTA CGCCGAACTC GCCGAAGGCG ACGTCGGTGA AGAGATCTAC
CTGCGCGGGG CGGTGATCAG CCCGGACGGC ACCCGTGACC TCCGGCTGTC CCGCACCGGA
ACGCCCGCCG ACGCGGTGGA GATCGGTAAG GCCCTCGCCA CTGATCTTCT CGACCTCGGC
GCCGACTCGA TCCTCGGCCA GCAACGGAAC CTTGGCCCGG GGACCCAGCA ATTTGGGAGC
ACAGTATGA
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| Protein sequence | MKVPLRLGTR GSALAMAQSG QVAEALTAAT GTPVELVEVV TTGDRSTAPV HQLGVGVFVS
ALRDALAAGA IDFAVHSYKD LPTAAAPGLY VAAVPPRQDP RDALVATGGR TLAELPPGAR
VGTGALRRIA QLHALGLQLE VQPIRGNVGT RLARVLGPEA DLDAVVLARA GLARLDRTDT
ITETLDPMLM LPAPAQGALA VECRSDDSAL VELLAVLDHA PSRATVVAER ALLATLEAGC
SAPVAAYAEL AEGDVGEEIY LRGAVISPDG TRDLRLSRTG TPADAVEIGK ALATDLLDLG
ADSILGQQRN LGPGTQQFGS TV
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