Gene Strop_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0214 
Symbol 
ID5056652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp244878 
End bp245255 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID640472486 
Producthypothetical protein 
Protein accessionYP_001157077 
Protein GI145592780 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTAA GAAGCAAGTC GAGTGGGAAG AGTAAGGAGC CGTTCGTGCG CCCAGGTGGA 
CAGCCGAACA TGCAGCAGAT GCTGAAGCAG GCGCAGAAGA TGCAGCAGCA GATCGCCAAG
GCGCAGGCCG AGCTGGCCGA GGCGGAGCTG ACCGGTGCCG CGGGTGGCGG CCTGGTCACC
GCGACCGTCG CCGGCACCGG CGAGCTCAAG TCGGTCGCGA TCGACCCCAA GGCGGTTGAT
CCGGAGGACG TCGAGACCCT GGAGGATCTG GTGGTCGCTG CCGTGCGTAA CGCCGCGGAG
GCGGCCCGGG AGCTGACCGA CCAGAAGATG GGGCCGGTGG CCGGGGGCAT GGGCGGCCTC
GGCCTGCCCG GTTTCTGA
 
Protein sequence
MSVRSKSSGK SKEPFVRPGG QPNMQQMLKQ AQKMQQQIAK AQAELAEAEL TGAAGGGLVT 
ATVAGTGELK SVAIDPKAVD PEDVETLEDL VVAAVRNAAE AARELTDQKM GPVAGGMGGL
GLPGF