Gene Strop_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0148 
Symbol 
ID5056581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp160272 
End bp160838 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID640472415 
Producthypothetical protein 
Protein accessionYP_001157011 
Protein GI145592714 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC ACGTGCCGAC CGTCCGCGCC GCGCTGTTTT TCACCATCCG ATCAGGTGAA 
CAAGGCCCAC GTTCGGCCCC AGCGTCGGCT GACAGCATCG GAACCGTGCT GGTCGTGACG
ACGGATCAAC TACCCGGTTA TGAGGTCCGC CAGATCCTCG GCGAGGTGGT CTCCTCGATG
GCCAGGACCC GTAACCCGTA CCGCGAGGGC GTGAAGAACC TCCGTGGCGG CGCGTACGAC
CCGATGGCGC CGGACAACCT CACCCGCTGG CGTGCGGACT CGGTGGCCCG CCTCGGCGAG
GAGGCCCGCC GGCTCGGCGC GAACGCGGTG ATCGGAATGC GGTTCGACAG CCGGGACTGC
GGCGAGATGT GGATGGAGAT CTGCGCCTAC GGCACGGCCG TGATCGTGGT ACCCCGAGTA
CCCGACGTCA TGCCCCCCGA CCAACCCCTG GTCGCCGCGG AGACCGCAAA CGAGCCAAGG
ATCGCGCCCG AGCCCAGCGG CATCGGCGAG CCGGCCACCG CGCCCGACCT GCGTAGTGCG
GCCGAGACCC CCACCCCCGA GGTCTGA
 
Protein sequence
MAGHVPTVRA ALFFTIRSGE QGPRSAPASA DSIGTVLVVT TDQLPGYEVR QILGEVVSSM 
ARTRNPYREG VKNLRGGAYD PMAPDNLTRW RADSVARLGE EARRLGANAV IGMRFDSRDC
GEMWMEICAY GTAVIVVPRV PDVMPPDQPL VAAETANEPR IAPEPSGIGE PATAPDLRSA
AETPTPEV