Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0148 |
Symbol | |
ID | 5056581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 160272 |
End bp | 160838 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472415 |
Product | hypothetical protein |
Protein accession | YP_001157011 |
Protein GI | 145592714 |
COG category | [S] Function unknown |
COG ID | [COG0393] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGGCC ACGTGCCGAC CGTCCGCGCC GCGCTGTTTT TCACCATCCG ATCAGGTGAA CAAGGCCCAC GTTCGGCCCC AGCGTCGGCT GACAGCATCG GAACCGTGCT GGTCGTGACG ACGGATCAAC TACCCGGTTA TGAGGTCCGC CAGATCCTCG GCGAGGTGGT CTCCTCGATG GCCAGGACCC GTAACCCGTA CCGCGAGGGC GTGAAGAACC TCCGTGGCGG CGCGTACGAC CCGATGGCGC CGGACAACCT CACCCGCTGG CGTGCGGACT CGGTGGCCCG CCTCGGCGAG GAGGCCCGCC GGCTCGGCGC GAACGCGGTG ATCGGAATGC GGTTCGACAG CCGGGACTGC GGCGAGATGT GGATGGAGAT CTGCGCCTAC GGCACGGCCG TGATCGTGGT ACCCCGAGTA CCCGACGTCA TGCCCCCCGA CCAACCCCTG GTCGCCGCGG AGACCGCAAA CGAGCCAAGG ATCGCGCCCG AGCCCAGCGG CATCGGCGAG CCGGCCACCG CGCCCGACCT GCGTAGTGCG GCCGAGACCC CCACCCCCGA GGTCTGA
|
Protein sequence | MAGHVPTVRA ALFFTIRSGE QGPRSAPASA DSIGTVLVVT TDQLPGYEVR QILGEVVSSM ARTRNPYREG VKNLRGGAYD PMAPDNLTRW RADSVARLGE EARRLGANAV IGMRFDSRDC GEMWMEICAY GTAVIVVPRV PDVMPPDQPL VAAETANEPR IAPEPSGIGE PATAPDLRSA AETPTPEV
|
| |