| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0088 |
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| Symbol | |
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| ID | 5056521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 95829 |
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| End bp | 96956 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640472355 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001156951 |
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| Protein GI | 145592654 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCC TCGTACGTAC GCAGCTTTCC CAGCTGGGCC GCGGCCCGCT GAGCCCCGGA
TCCCGCGCCG GTCTCGGCGC GGCCTTTGCC CTGCTCGCAT TCGTCTCGGC GCTGGAGTAC
GCCGACGGCC GTGCGGCCAA CTACATCGCA CTGCTGGTCG CTGCCCCGTT CGTGGCCGCT
GCCCTGGCCT CCTGGCGGGT GGTGCTGGGA GTGGGGGTCA CCGCCGTCGT GCTCGGTGTC
GGCTTTGCGC TGGCAGATGG GGTTGGCTCA CTGCCGTCCG CGGTCGCGGT CGCTGGCATC
GCCCTGGGTG CCGCGTTGGC GGCCACCACG GCGTCGATAC GGCAGCGGCA GACCGAGCGG
ATCGCGGAGT TGTCGAGGCT CGCCACGGTT GCTCAGCAGG CGGTACTCCG TCCGCTCGGT
CCACAGGTCG GCTCCTTGGC CGTCGCCGCT CGATACATCT CCTCCACGGC CACCGCGGAG
ATCGGCGGTG ACCTGTACGA GGCCTTGGAC ACGCCATACG GCGTACGCAT GATCATTGGT
GATGTCCGAG GTAAGGGCCT GGAGGCGGTC CGGTTGGCCA GCATCGTACT GGGGTCCTAC
CGGCATGTGG CGTACGAGCG GGCCGACCTG CGAGCGGTCG TCGCGGACCT GGACCGGGCG
GTGGCTCGTA GCGTGGGCGA TGAGGACTTC GTGACCGCGG CTCTGGTCGA GGAGCGGGGT
GGCACCCTGA CCATCGTCAA CTGTGGGCAT CCGGCGCCGC TGTTGTTGCG CCGGGGGGCG
GTCGTCGCGT TGGAGCCGCC GGCGCCGGCT CCGCCGTTGG GGTTCATGCC GGCGGTCCGG
GCCCGGGTGG AGCGGTTGGA ACCGGGCGAC CGGCTGTTGT TGTTTACCGA CGGGCTCGGC
GAGGCCCGGC GGGACGGCGA GTTCTTCCCG ACCACCGGCC GAGCCTGGCG GTTACTCGGG
CATGGCACCG TCGCCGACGG GCTGGCGTCC CTGGAGGCGG CGCTGGTCGA GTGGGTGTAT
GACCGGCTCG ACGATGACAT CGCGCTGGTC CTGATGGAGT ACACCGGTAC CCGGTCCGGG
GGTTCGGTCG CCGTGCCGAG TTGGGAGGTC GGCACGGCGG AGGGATGA
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| Protein sequence | MLSLVRTQLS QLGRGPLSPG SRAGLGAAFA LLAFVSALEY ADGRAANYIA LLVAAPFVAA
ALASWRVVLG VGVTAVVLGV GFALADGVGS LPSAVAVAGI ALGAALAATT ASIRQRQTER
IAELSRLATV AQQAVLRPLG PQVGSLAVAA RYISSTATAE IGGDLYEALD TPYGVRMIIG
DVRGKGLEAV RLASIVLGSY RHVAYERADL RAVVADLDRA VARSVGDEDF VTAALVEERG
GTLTIVNCGH PAPLLLRRGA VVALEPPAPA PPLGFMPAVR ARVERLEPGD RLLLFTDGLG
EARRDGEFFP TTGRAWRLLG HGTVADGLAS LEAALVEWVY DRLDDDIALV LMEYTGTRSG
GSVAVPSWEV GTAEG
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