Gene Sterm_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3873 
Symbol 
ID8599319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp4118467 
End bp4119201 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content32% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003310638 
Protein GI269122461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA AACACAAATA TCTGGAAATA AAAGAAGAAA TAAAAAATGA TATATTAAAT 
AAAAAATATG AAGTGGGTGA AAAAATACCC TCTGAGAGGG AACTTGCCTC TTTTTACAGT 
GTGACAAGAG TGACTGTCCA AAAAGCTATG AACAGTCTTG AGCAGGAAGG CTTTATAGAG 
AGAGTTCACG GTAAAGGTAT GTTTGTACTG AAAAATACTG AGGGAAACAT ATATATTTTT 
AATAATGAAA AAAGTGACAG TGTTCTCGGT TTTTCGAGAG AGTTTAAAAA TAAAGTGAAA 
ATCAGCAGTG AGCTTATAGA ATTTGAAATA ATAAAGGCCG GAAAAGAACT GGCAAAGCTT 
CTTGAAATAA ATGTGTGTGA TAAGGTTTAT TTTATAAGAA GGGTAAGACT CATAAATAAT 
ATGCCGGTTA CAGTGGAGGA TACCAATATT CCCGTAGGCA TTATTAATGA AATTCCCAAA 
GAGGTATTAA TAAAGGGCTC TCTTTATGAA TATATAGAAA AAATCACAGG GAAAAAAATA 
AAGGATTCTG ATACTATAAT TGAGGCATCA TTGTTTACTG ACGAACTGGC AAAGCTTTTG 
AAAATAAAGG CGGGGCTTCC TATGCTGAAA ATGACTGAGG TTACAAGGCT TGAAGATAAA 
ACAGTGTTTA ACTACTCATA CAGCTATAAC AGGGGTGATG TATTTAAAGT AAAGAATATG 
AAAATAGAAA AATAA
 
Protein sequence
MEKKHKYLEI KEEIKNDILN KKYEVGEKIP SERELASFYS VTRVTVQKAM NSLEQEGFIE 
RVHGKGMFVL KNTEGNIYIF NNEKSDSVLG FSREFKNKVK ISSELIEFEI IKAGKELAKL 
LEINVCDKVY FIRRVRLINN MPVTVEDTNI PVGIINEIPK EVLIKGSLYE YIEKITGKKI 
KDSDTIIEAS LFTDELAKLL KIKAGLPMLK MTEVTRLEDK TVFNYSYSYN RGDVFKVKNM 
KIEK