Gene Sterm_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3723 
Symbol 
ID8599169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp3952552 
End bp3953115 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content29% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003310488 
Protein GI269122311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000134359 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTGTTA ATACCAAAGA AAAAATTTTA TCTGCCGCAG AAAAATTATT CATGGAAAAT 
GATCATGAGG ATGTTTCTGT CAGAAGAATA TGTGCAGCAG CCGGAGTTTC TAACGGCTCA 
TTTTATCATC ATATAGGGTC AAAAGAAAAT CTTATCAAAA TGATTTACTA TTCTTCTGAT 
GAAATGGGAA TAAAAATTTT CCTGCAAAAA AGTAAAAATA AAAATATTTT TGAAAAAATA 
GAATTAATCG CTGATATTTA TACAGATTTT GCTTTAAAAT ACGGGCCCAA ATTTTGCAAA 
CATATTATTT ATCTGAAACT AAGCGATCAC TTCATTGATT CGGAAACTTA TTTATTAGGC 
TCTCAGATGA AATTGCTTAT TAAGGATGCT TATTCTAATA ATTATTTTAA TAATGAATAT 
ACCGAGAATT TTATTCTTTC TGTTTTTCTT ACTACCATAA GAGGTTTTGC TTATGAATGG 
AGTACACAGA ACGGAGAAGG CGATCTAAAA AAATACACCT TATCCGCAAT AAAAATTCTG 
ATCAATCAAT TTAAAAATAT TTAG
 
Protein sequence
MGVNTKEKIL SAAEKLFMEN DHEDVSVRRI CAAAGVSNGS FYHHIGSKEN LIKMIYYSSD 
EMGIKIFLQK SKNKNIFEKI ELIADIYTDF ALKYGPKFCK HIIYLKLSDH FIDSETYLLG 
SQMKLLIKDA YSNNYFNNEY TENFILSVFL TTIRGFAYEW STQNGEGDLK KYTLSAIKIL 
INQFKNI