Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2989 |
Symbol | |
ID | 8598444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3132929 |
End bp | 3133786 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | diaminopimelate epimerase |
Protein accession | YP_003309763 |
Protein GI | 269121586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000823328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC TAAAATTTGA AAAATATCAC GGACTGGGAA ATGATTTTGT GATATTTGAT GAAAAAGAGC TTGAAAAAAA TAATATAAAA GATTACAGCA AACTTGCCGA AAAAGTGTGT CACAGACGAT TCGGAATCGG AGGAGACGGA ATACTTATAC TAAAGTATGT GGATGAAGTT CCTTTCATGC TGTACTATAA TTCTGACGGA AGTCAGGCCC CGATGTGCGG CAACGGAATA AGATGCTTTG CATATTACCT GAAAAATAAC AGCTATGTAG CAGAAGATAA GTTTACTGTG AAAACAATAC CGGGAGATAT GATACTGGAT ACATATACAG ATGAAAAAGG AACATTTTTT GCAAGGGTAA ATATGGGAAA GCCTGTATTT AATGTAAAGG AACTGATAAA TACGGATAAA GATAATTTTA TAAATGAAAA AATAACAATA GACGGTGAAG AAATAGAGAT ATCGTTTATA TTTATGGGAA CAGACCATTC AATGATATTT TCGGATGATC TTTCAAAAAC AGATATAGAG GGAACAGGAA AAAAAATAGA AAATTTTACG GAATTATTTC CTAAAAAAGT AAATGCTAAT TTTGTAGAAA TAAAGGACAG AAATAATATA AAGGTAACAA CATGGGAAAG AGGTGCAGGA CTTACACTGG CCTGTGGTAC AGGAGCCACA GCTTCTGCAG TTTTGACGGC ATATCTCGGG AAAACAGACA GTAAGGTGAA CGTAGAAGTA CCGGGCGGAA TTCTTGTGAT AGAATATCCG GAACACGGAA AAGAAGCTTT TATGACAGGT CCCAGCGAAA AGGTGGCAGA AGGATATTAC AGCTATGAAG GCGAGTAG
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Protein sequence | MLKLKFEKYH GLGNDFVIFD EKELEKNNIK DYSKLAEKVC HRRFGIGGDG ILILKYVDEV PFMLYYNSDG SQAPMCGNGI RCFAYYLKNN SYVAEDKFTV KTIPGDMILD TYTDEKGTFF ARVNMGKPVF NVKELINTDK DNFINEKITI DGEEIEISFI FMGTDHSMIF SDDLSKTDIE GTGKKIENFT ELFPKKVNAN FVEIKDRNNI KVTTWERGAG LTLACGTGAT ASAVLTAYLG KTDSKVNVEV PGGILVIEYP EHGKEAFMTG PSEKVAEGYY SYEGE
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