| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1998 |
|---|
| Symbol | |
|---|
| ID | 8597464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 2128299 |
|---|
| End bp | 2128760 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | transcription activator effector binding protein |
|---|
| Protein accession | YP_003308784 |
|---|
| Protein GI | 269120607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000299964 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACG AAATAGTAGA AATACCTACT AAAACAATGG CTGGAATAAG TATTCGGACT
ACCAACGAAA ATATGCAGGC TGTTAATGAT ATAGGGAAAT TATGGGAAGA ATTCTGGAAC
AAAAATATAT TTAGCTTTAC TGAAAATAAA AAAAACAATA AGATGTACGG AGTATACACC
AATTATGAAG GTGATTTTAC AAAGCCTTAT GATTTTTACG CATGCTGTGA AGTAAGCAGT
GAGGGGAACA ATAACGATGA ATTTTCTGTG ATATCTGTTC CCGAATCAAA ATACGCAAAA
TTTTCTCTAA GAGGGAACTA TGATGAAGCT GCAGAAAAAT TATGGAATAC AATATGGGAG
ACAAAACTTG ACAGAAAGTA CACATATGAC TTTGAGGTTT ATCATAATGA TGGTAATGAC
CCTGAAAATT TACTTCTGGA GATATATGTT GCCGTGAATT AA
|
|---|
| Protein sequence | MKYEIVEIPT KTMAGISIRT TNENMQAVND IGKLWEEFWN KNIFSFTENK KNNKMYGVYT
NYEGDFTKPY DFYACCEVSS EGNNNDEFSV ISVPESKYAK FSLRGNYDEA AEKLWNTIWE
TKLDRKYTYD FEVYHNDGND PENLLLEIYV AVN
|
|---|
| |