Gene Sterm_1540 details

Gene Information

• Locus tag: Sterm_1540
• ID: 8597010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 1639069
• End bp: 1639839
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 35%
• Product: ABC transporter related protein
• Protein accession: YP_003308330
• Protein GI: 269120153

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000346949
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGAACAA TTACAGAATT AATATTGGAA CTAAGTAATG TTTCAAAATA TTATGATAAA 
AAGAAAGTCC TGGACAATAT AAGCCTGAAA ATAAAAAAAG GCAGTGTTAA TGTCATTCTC 
GGTCCGAGCG GATGCGGAAA AAGCACGCTC CTTCGCTGTC TGAACGGACT CGAGCCTATA 
CAGGAAGGAA ATATCGTATT TTCAGGAATA AACTTAAATG ATAAAAAAAT AAAATGGGAA 
AAAATAAGAC AAAGAATAGG CATGGTTTTT CAAAGCTATG ATTTGTTTCC TAATATGACT 
GTCATTGAAA ATATACTTCT TGGCCCTCTA AAAGTACAAA AACGTGATAA AAGCGAAGTA 
CTGGCTCAGG CTGAGGAACT TTTGGAGAAA GTCGGACTTG CAGACAGAAA AAATTCTTAT 
CCCAAAGAAC TGTCAGGCGG TCAGAAACAA AGAATCGCAA TTGTAAGAGC ACTTTGCATG 
AATCCGGAAA TAATGCTTTT CGATGAAGTA ACTGCTGCTC TTGATCCGGA AATGGTAATG 
GAGGTTCTGG AGGTTATGCT GAATTTAGCA GGACAAGGAA TAACAATGGT AATTGTTACT 
CACGAAATGA GATTTGCCAG AGCAATTGCC GACAAAATTA TTTTTATGGA TGAAGGAAAA 
ATATGTGAGA TGAAAGATCC TGAGACTTTT TTTACAAATC CTGAAACAGA ACGTGCAAAA 
TTATTTTTAA ATAAATTTAC ATATATCGAA AATATGAAAA GGAGAGATTA A 

 

Protein sequence

MRTITELILE LSNVSKYYDK KKVLDNISLK IKKGSVNVIL GPSGCGKSTL LRCLNGLEPI 
QEGNIVFSGI NLNDKKIKWE KIRQRIGMVF QSYDLFPNMT VIENILLGPL KVQKRDKSEV 
LAQAEELLEK VGLADRKNSY PKELSGGQKQ RIAIVRALCM NPEIMLFDEV TAALDPEMVM 
EVLEVMLNLA GQGITMVIVT HEMRFARAIA DKIIFMDEGK ICEMKDPETF FTNPETERAK 
LFLNKFTYIE NMKRRD