Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0977 |
Symbol | |
ID | 8596456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1039918 |
End bp | 1041117 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003307776 |
Protein GI | 269119599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000913378 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCCTA CAATAATAAA AAATATAGAA TGTATTGTAA CAAAGCCGGG GCGCCATAAT CTTACAGTAG TAAAAGTGGA AACAGATAAA AATATTACAG GATACGGATG TGCAACTTTT CAGCAGAGAC CTCTTGCAGT AAAAACAATG GTAGATGAAT ATATAAAGCC GCTGCTGACA GGAAGAGATG CTAATAATAT AGAAGATATA TGGCAGATGC TGATGGTAAA TTCCTACTGG AGAAACGGTC CGGTAATAAA TAATGCAATA TCGGGAATAG ATATGGCACT GTGGGATATA AAGGGGAAGC TGGCAGGAAT GCCTTTATAC CAGCTGTTCG GCGGTAAATC GAAAAATGCG GTTCCTGTTT ATACTCATGC AGCCGGAGAA AATCTTAATG AATTATATGA GAAAATAGAA TTTTTTTTAA ATAAAGGTTA TCGTTATATA CGATGCCAGC TTGGGTTTTA CGGAGGAAAT TCAAAAGAGA TACATATGAC TGAAAATCCT GTCAAGGGGG CCTATTTTGA TCAGGATGAG TACATAAAAA CAACTTTATT TATGTTTAAA TCTTTGCGTG AAAAATACGG GGACAGATTT CACATACTGC ATGATGTCCA TGAACGTCTG TTTCCAAATC AGGCTCTGCG TTTTGCAAAG GAAGCTGAGA AGTATAACCC GTACTTTATA GAGGATATAC TTCCTCCGGA TCAGAATGAG TGGCTTTCAC AGATAAGAAG CCAGTCTTCG GTTCCGCTGG CAACAGGAGA GCTGTTTAAT AATCCTATGG AATGGAAAAA TATTATTATA AACAGACAAA TAGATTTTTT ACGCTGCCAT GTATCGCAGA TTGGCGGTAT AACTCCTGCA TTAAAGCTCG CAGCTTTATG CCAGACATTC GGGGTAAGAA TGGCATGGCA TACACCGCCT GATATAACTC CTGTCGGGTC GGCAGTTAAT ACACATCTGA ATATATATCT TCATAATTCG GCAATTCAGG AATACGTGGA GGAACAGGAA GCTGTACTTA CGGTTTTCAC AGGAGCGGAA AAACCAAGAG ACGGATATTT ATATCCCGCA GAGAGAGCTG GTATAGGTGT AGAATTCCTC GAAGAGGAAG CAAAAAAATA TCCTGTGGAA TACAGACCGC ATGAATGGAC ACAAAGCAGA CTGCCGGACG GAGCTATTAT GACTCCTTAA
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Protein sequence | MTPTIIKNIE CIVTKPGRHN LTVVKVETDK NITGYGCATF QQRPLAVKTM VDEYIKPLLT GRDANNIEDI WQMLMVNSYW RNGPVINNAI SGIDMALWDI KGKLAGMPLY QLFGGKSKNA VPVYTHAAGE NLNELYEKIE FFLNKGYRYI RCQLGFYGGN SKEIHMTENP VKGAYFDQDE YIKTTLFMFK SLREKYGDRF HILHDVHERL FPNQALRFAK EAEKYNPYFI EDILPPDQNE WLSQIRSQSS VPLATGELFN NPMEWKNIII NRQIDFLRCH VSQIGGITPA LKLAALCQTF GVRMAWHTPP DITPVGSAVN THLNIYLHNS AIQEYVEEQE AVLTVFTGAE KPRDGYLYPA ERAGIGVEFL EEEAKKYPVE YRPHEWTQSR LPDGAIMTP
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