Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0439 |
Symbol | |
ID | 8595930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 486915 |
End bp | 489020 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | Hedgehog/intein hint domain protein |
Protein accession | YP_003307250 |
Protein GI | 269119073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000848459 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAA TTAAATTTGA GGAAGTATTT GTATGTCATC AGGCTTATAT ATATTGTCCA TTTGGAGAAT TTATACAGCC GGTAGAAGCT ACTGTAAATG AGACAGCTAC TTTTCAGGGG AAAAGAGTAT TAACCAAAGA TGATGACGTG GTTGGCAGGA ATATTCATCC ATTTAAAAAA TGTGATAAAA AAGGTGAATG TCTGCTTTCA GGAACTGTTT CCTGGCAAAA AGCCAGAACA GATATAAAGG TAAACGGATC ACGGCTGCTG ACAGGGGAAT CATACTTTAT GTGTCCGCAT GTGAGAGGTA CAAAGATAGA ATTTAAAGAT GTAAAACAGG AACCGGGACC AGAAGTAGAC AAGAGAAGCA AGTTAGAGAT ATTTACTGAT GAAGCAAGCG GATTAATGAG TGCTCTTATG GGAATAAATG GAGTATTTCA AGCAACAGAA GGAGCAGTAC AGGTAAAAAA AAGGTATGAA AATATTTATA ATGCAACAGT TAAAGATGTA AAATATTTTT CAAAAGATAA TCTTAGGACT CTTGAAGAAA TATGGAGTTA TTCATTACCA GGTCAGTTCA CACATGGAGA TCCATATTCA AAAGATATGA AAAGCTATAT AAAGAATGAG GGGATATTTG CTTATGAAGA AGGAGAGGAG GGGTATTCGA GCGTAACAGG TAGCGTGCTG TCCTCAATGG CACTGGATGT TATACATCCT GCATACGGAG CAATGGAAGA TGCGTATGAT TTCAAGAATG CCTATAACGA CGGAGATAAA TTAGGTATGG CCCTTTCAGC AGTAGGTTTT ATTCCTGTAT TAGGTGCCGG AATAAAAAAA GGAACAGGTA AAGCAATGAA AATTGCCGGT GAATCAAAAA TGCTGAAAAA GGGCTCTAAA ATAGGAGATG CGATAGTAGA CAGCAAAGCT GTGAAACTAT TTCAAAATAC TTTATCTGGA AAAGTAAATA AAGTGGTACG GGGATTTGGC GATACTTTGA AAAGTATAAC GGAAGCCGGG TTAAATTTGA AAAAAAGGTT TGTGAGTTCT ACAAAAGCTC TTAACAGAAA AATAAATATG GCAATTTGTA ATTTGATCGA ATCTGGATGT TTTGTAGGCG GGACTTTAGT TAATACTGAA TATGGACTTA AGAAAATAGA AAATATTAAA ATTGGGGAGA AAGTTTACAC TTATGATTTA GTTAACAGAG AAGTAATTTT GAAAGAAGTA ACAGAGACTT TTAATGAAAG AGTCAGTAAA ATAATTAAAA TAGAAATAGA AAATAATGTT ATAATTGAAA CAACTGTCGA GCATCCTTTT TATGTGAAGG ATATAGGATG GGTGGAAGCT GGAAAACTGA AGGAAGGTGA TAAATTATTT TCCAGGGAAC TGGGAGATAC TGAAATAGCA GCAGTTCGGG AAGATATATA TTTAGACAGG GATGTATATA ACTTACAATT AGAGGGGAAT CATAATTTTT TTGTTTCTGA GTTGGAGCTG TTGGTGCATA ACGATACAGC TTGTGCGGAG TTGCTTAAAA AGCTGGATGA TGATATAGCT AAATTGATTA AAGAAGGGGC TTCTGAGGAT GTTATAAATA GTTTAAGAAA ACAGAGAAAG CATATTATAG AAAAAAATCT TAATGAATTT CTAAATGGTA CTAAAAAATT TGATGATGTG CTTGATGATT ATGCAAGATT ATATGCTGAT GTTGTTGATT CTAATGAAAT ATGGCGTTGG GAACGAGATA TGATAGGTGG ATCAGAACTA ACTGCAAGAC AAAGAAAGGC AATTAGAACA AAGGCATTTG ATGACGGTTT ATTACCAATT GTAGAGTTTA AAGCAGGTAC GAAGTATCCA GACTTTGAAA AAGCTGGTTT AATAATTAAA GAAGATATGT TACCAGAAGA GTTGTGGAAA GCATCAGATA GACGTCAATT TGATTGGTTA GACAATAGAT TAGTGGATGG GCGTCCTCGA GGAACTACTT GGAATCATTC AGATATAGCA GGTAGAATGG AATTGGTTCC ATTTGGTATT CATAATGTAA TAAATCATAG AGGTGGAAGA AGTCCTGGAC AATGGGCTTA TGTTTTAAGA AGATAG
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Protein sequence | MGEIKFEEVF VCHQAYIYCP FGEFIQPVEA TVNETATFQG KRVLTKDDDV VGRNIHPFKK CDKKGECLLS GTVSWQKART DIKVNGSRLL TGESYFMCPH VRGTKIEFKD VKQEPGPEVD KRSKLEIFTD EASGLMSALM GINGVFQATE GAVQVKKRYE NIYNATVKDV KYFSKDNLRT LEEIWSYSLP GQFTHGDPYS KDMKSYIKNE GIFAYEEGEE GYSSVTGSVL SSMALDVIHP AYGAMEDAYD FKNAYNDGDK LGMALSAVGF IPVLGAGIKK GTGKAMKIAG ESKMLKKGSK IGDAIVDSKA VKLFQNTLSG KVNKVVRGFG DTLKSITEAG LNLKKRFVSS TKALNRKINM AICNLIESGC FVGGTLVNTE YGLKKIENIK IGEKVYTYDL VNREVILKEV TETFNERVSK IIKIEIENNV IIETTVEHPF YVKDIGWVEA GKLKEGDKLF SRELGDTEIA AVREDIYLDR DVYNLQLEGN HNFFVSELEL LVHNDTACAE LLKKLDDDIA KLIKEGASED VINSLRKQRK HIIEKNLNEF LNGTKKFDDV LDDYARLYAD VVDSNEIWRW ERDMIGGSEL TARQRKAIRT KAFDDGLLPI VEFKAGTKYP DFEKAGLIIK EDMLPEELWK ASDRRQFDWL DNRLVDGRPR GTTWNHSDIA GRMELVPFGI HNVINHRGGR SPGQWAYVLR R
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