Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0178 |
Symbol | |
ID | 8595674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 189581 |
End bp | 191347 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | penicillin-binding protein 2 |
Protein accession | YP_003306994 |
Protein GI | 269118817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAG ATGACGAAGG GAGAAGTATA GCTTTTCTTG TGATAGTCGG ATTTATTTCG ATGGTTTTGA TAGGTCGTCT GGTATATTTA CAGATAATAC AAAACGATCT TTTTAAACAA AAAGCACAAA GAAATAGTCT GAAATCCAAG GTAATGAAAG CAAGCCGGGG ATTAATACTG GACAGAGACG GTAAGGTACT TACAAGAAAT AATGTAGGTT ATCAGGTTGT ATACATACTG GGGAAAAAGC GGGAAGCAAA TCCTGATGAT GTTCTTCTGA TTTCGGAACT GACTGGGATG AGTGTTACCG ACCTTAAGAA ACGTATAAAA AATCAACCCA GAGCAGGGTA TGAAAATGAA GTAATAGCAG TGGAAGATCT GGATAAAGAT ATTGCCCTTA GAATGGCCGA AAAGATAACG GACAGCGAAA GAATAGAGGT AAGGGAATAT AATAAAAGAT TTTATCCGGA AGATATGCTT GCTTCACATA TAATAGGTTA TATGAAGCCT ATTGATGATA AAGAGTGGGA AGTCCTGAAA AGTGACGAAT CATACAACAG AAATGATTAT ATAGGAAAAA GAGGTGTGGA GAAACAATAC GATAAAGTAT TAAAAGGAAT AGACGGGGAA GAAATAGTAG AGGTAGATGC CCACAGAAAC GTAAAATCAA TACGTGACAG AAATGACAGT GTGGCAGGAA AAAATATCTA TCTTTCGATA GATTTAGATT TACAAAGATA TATGACAGAA CAGTTTAAAA ATGACAAGGG TGCCTTTATT GCCATGGAAG CTAAAACAGG AAAAATAATA GTGGCAGTAA GCAATCCGGA ATATAGTCTG AACTTTATGT CATCAAGATT TTCATCAGAA GAGTGGGATA AATTAATTAA TGATCCTAAT AAGCCTCTGA ATAATAAATT TTCAGGTTCT GCGTATCCGC CGGGATCTAC TTTTAAAGTG GTCACAGGGA TGGCAATACT TGAAGCAGGA ATAAGTCCGC AGCAGACAAT GTATTCGACA GGTTCCTTTC AGATAGGAAG AACGATTTTC AGAGATTCAC ACAGAGGCGG ACATGGAACA ACAAATTTTT ATAAAGCAAT AAGAGAGTCA GTAAATACAT ATTTTTACAC ATTTTCGAGA GAAGTGGGAA TAGAAAAGGT TGCAAAAACA GCAACGGACT TCGGTTTGGG CGAAAGAGCC GGGATAGATA TTCCCGGTGA AGAAAAAGGA GTAGTCCCTA CACCGGAATG GAAAATGAAA AGATTTAACC AAAAATGGCT TCCGGGTGAT CTGGTGAATA TGTCCATAGG TCAGGGATAT GTTCTAACCA CGCCGCTGCA GGTACTGATG GTATATCAGG GAATAGCCAA TAAAGGAGTA ATGTATAAAC CAACTGTTGT AGATAAATTT GTATCTTTTG ATGGAAAAGT AGAAAACAAG GAACCTGAGG TGCTTAGAAA GCTTCCTTTT AAGCCTGAGA ATATTGAAAT TATGAGAGAA GCTCTGAAAG AACCTGTGAA TAAACCAGGC GGAACTGCAA GAATACTTTA TTTTCCAAAT ATTCCTGTTT CAGCTAAAAC AGGAACGGCA CAAAATACCG GATTTAAAGA TCACCATTCA TGGCTGGCGG GATATTTCCC TTCAGATAAT CCTGAAATCG TATTTATATC ACTTGTAGAA GGTGGAGGAT ACGGAGGAGT GGCATCCGGA GATTTGGTCA GAAAATTTAT AATAAAGTAT AATGAAAAAT ACAATATAGC ACAATAA
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Protein sequence | MDIDDEGRSI AFLVIVGFIS MVLIGRLVYL QIIQNDLFKQ KAQRNSLKSK VMKASRGLIL DRDGKVLTRN NVGYQVVYIL GKKREANPDD VLLISELTGM SVTDLKKRIK NQPRAGYENE VIAVEDLDKD IALRMAEKIT DSERIEVREY NKRFYPEDML ASHIIGYMKP IDDKEWEVLK SDESYNRNDY IGKRGVEKQY DKVLKGIDGE EIVEVDAHRN VKSIRDRNDS VAGKNIYLSI DLDLQRYMTE QFKNDKGAFI AMEAKTGKII VAVSNPEYSL NFMSSRFSSE EWDKLINDPN KPLNNKFSGS AYPPGSTFKV VTGMAILEAG ISPQQTMYST GSFQIGRTIF RDSHRGGHGT TNFYKAIRES VNTYFYTFSR EVGIEKVAKT ATDFGLGERA GIDIPGEEKG VVPTPEWKMK RFNQKWLPGD LVNMSIGQGY VLTTPLQVLM VYQGIANKGV MYKPTVVDKF VSFDGKVENK EPEVLRKLPF KPENIEIMRE ALKEPVNKPG GTARILYFPN IPVSAKTGTA QNTGFKDHHS WLAGYFPSDN PEIVFISLVE GGGYGGVASG DLVRKFIIKY NEKYNIAQ
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