Gene Sterm_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0178 
Symbol 
ID8595674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp189581 
End bp191347 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content37% 
IMG OID 
Productpenicillin-binding protein 2 
Protein accessionYP_003306994 
Protein GI269118817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAG ATGACGAAGG GAGAAGTATA GCTTTTCTTG TGATAGTCGG ATTTATTTCG 
ATGGTTTTGA TAGGTCGTCT GGTATATTTA CAGATAATAC AAAACGATCT TTTTAAACAA
AAAGCACAAA GAAATAGTCT GAAATCCAAG GTAATGAAAG CAAGCCGGGG ATTAATACTG
GACAGAGACG GTAAGGTACT TACAAGAAAT AATGTAGGTT ATCAGGTTGT ATACATACTG
GGGAAAAAGC GGGAAGCAAA TCCTGATGAT GTTCTTCTGA TTTCGGAACT GACTGGGATG
AGTGTTACCG ACCTTAAGAA ACGTATAAAA AATCAACCCA GAGCAGGGTA TGAAAATGAA
GTAATAGCAG TGGAAGATCT GGATAAAGAT ATTGCCCTTA GAATGGCCGA AAAGATAACG
GACAGCGAAA GAATAGAGGT AAGGGAATAT AATAAAAGAT TTTATCCGGA AGATATGCTT
GCTTCACATA TAATAGGTTA TATGAAGCCT ATTGATGATA AAGAGTGGGA AGTCCTGAAA
AGTGACGAAT CATACAACAG AAATGATTAT ATAGGAAAAA GAGGTGTGGA GAAACAATAC
GATAAAGTAT TAAAAGGAAT AGACGGGGAA GAAATAGTAG AGGTAGATGC CCACAGAAAC
GTAAAATCAA TACGTGACAG AAATGACAGT GTGGCAGGAA AAAATATCTA TCTTTCGATA
GATTTAGATT TACAAAGATA TATGACAGAA CAGTTTAAAA ATGACAAGGG TGCCTTTATT
GCCATGGAAG CTAAAACAGG AAAAATAATA GTGGCAGTAA GCAATCCGGA ATATAGTCTG
AACTTTATGT CATCAAGATT TTCATCAGAA GAGTGGGATA AATTAATTAA TGATCCTAAT
AAGCCTCTGA ATAATAAATT TTCAGGTTCT GCGTATCCGC CGGGATCTAC TTTTAAAGTG
GTCACAGGGA TGGCAATACT TGAAGCAGGA ATAAGTCCGC AGCAGACAAT GTATTCGACA
GGTTCCTTTC AGATAGGAAG AACGATTTTC AGAGATTCAC ACAGAGGCGG ACATGGAACA
ACAAATTTTT ATAAAGCAAT AAGAGAGTCA GTAAATACAT ATTTTTACAC ATTTTCGAGA
GAAGTGGGAA TAGAAAAGGT TGCAAAAACA GCAACGGACT TCGGTTTGGG CGAAAGAGCC
GGGATAGATA TTCCCGGTGA AGAAAAAGGA GTAGTCCCTA CACCGGAATG GAAAATGAAA
AGATTTAACC AAAAATGGCT TCCGGGTGAT CTGGTGAATA TGTCCATAGG TCAGGGATAT
GTTCTAACCA CGCCGCTGCA GGTACTGATG GTATATCAGG GAATAGCCAA TAAAGGAGTA
ATGTATAAAC CAACTGTTGT AGATAAATTT GTATCTTTTG ATGGAAAAGT AGAAAACAAG
GAACCTGAGG TGCTTAGAAA GCTTCCTTTT AAGCCTGAGA ATATTGAAAT TATGAGAGAA
GCTCTGAAAG AACCTGTGAA TAAACCAGGC GGAACTGCAA GAATACTTTA TTTTCCAAAT
ATTCCTGTTT CAGCTAAAAC AGGAACGGCA CAAAATACCG GATTTAAAGA TCACCATTCA
TGGCTGGCGG GATATTTCCC TTCAGATAAT CCTGAAATCG TATTTATATC ACTTGTAGAA
GGTGGAGGAT ACGGAGGAGT GGCATCCGGA GATTTGGTCA GAAAATTTAT AATAAAGTAT
AATGAAAAAT ACAATATAGC ACAATAA
 
Protein sequence
MDIDDEGRSI AFLVIVGFIS MVLIGRLVYL QIIQNDLFKQ KAQRNSLKSK VMKASRGLIL 
DRDGKVLTRN NVGYQVVYIL GKKREANPDD VLLISELTGM SVTDLKKRIK NQPRAGYENE
VIAVEDLDKD IALRMAEKIT DSERIEVREY NKRFYPEDML ASHIIGYMKP IDDKEWEVLK
SDESYNRNDY IGKRGVEKQY DKVLKGIDGE EIVEVDAHRN VKSIRDRNDS VAGKNIYLSI
DLDLQRYMTE QFKNDKGAFI AMEAKTGKII VAVSNPEYSL NFMSSRFSSE EWDKLINDPN
KPLNNKFSGS AYPPGSTFKV VTGMAILEAG ISPQQTMYST GSFQIGRTIF RDSHRGGHGT
TNFYKAIRES VNTYFYTFSR EVGIEKVAKT ATDFGLGERA GIDIPGEEKG VVPTPEWKMK
RFNQKWLPGD LVNMSIGQGY VLTTPLQVLM VYQGIANKGV MYKPTVVDKF VSFDGKVENK
EPEVLRKLPF KPENIEIMRE ALKEPVNKPG GTARILYFPN IPVSAKTGTA QNTGFKDHHS
WLAGYFPSDN PEIVFISLVE GGGYGGVASG DLVRKFIIKY NEKYNIAQ