Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0039 |
Symbol | |
ID | 8595538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 47513 |
End bp | 48256 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003306858 |
Protein GI | 269118681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000112771 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA AAAGAATAGA CAGAATACTT CAGATGATAA AACTAAATAA TGCAGTGGGT ACAGGAGAAC TTGCCAAGAC ATTAAATGTA GCGGAAAGTA CAGTAAGGCG GGATCTTAAC CAGCTTGAAA AAATAGGGCT GTTAAAAAAA GTCCATGGCG GAGCAGTAAA GCTTGAGAAT CAGGTTATAT TTGAAATGTC CTATTCAGAA AGAGAAGAGC TTAACTTAAA GCTGAAAGAA CAGGTTGCCA AAAAAGCAGC AGGATACATA AATGACAATG ATACAATTTT CATCGGACCG GGAACTACAA CAGAGATGGT TCTAAAATAT ATAAAAACTA AAAATAATAC AATTATCACC AATTCATTAA GTGCTTTTTC AAAATATTCC TCACTTCCGT ATAAACTGAT AATTGCTCCC GGTTATCTAA GAACAGAAAC CAGTGCAGTA ATAGGAACCT TTACAAATAA TTTTCTAAAA AAAATAAATG TGGATATAGC CTTTTCAGGT GCAAACTGTA TTAATGACAG CCAGCTTATG TCTTCAAATG AGGAAGAGGG GACAGCACAG GAAATAATAC TTAATAATGC CAAAAAAAGA TTCCTGCTTG TAGACAGCAC AAAGTTTGAA ACAAAATCAT TTTTTACGTT CTATTCTGCG GAAAATCTTG ATGCAATAAT AACAGATAAC GAAATAAACA GCAAAATAAA AAATAAGTAT AAAAAATTTT GTAAAGTATT ATAA
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Protein sequence | MKEKRIDRIL QMIKLNNAVG TGELAKTLNV AESTVRRDLN QLEKIGLLKK VHGGAVKLEN QVIFEMSYSE REELNLKLKE QVAKKAAGYI NDNDTIFIGP GTTTEMVLKY IKTKNNTIIT NSLSAFSKYS SLPYKLIIAP GYLRTETSAV IGTFTNNFLK KINVDIAFSG ANCINDSQLM SSNEEEGTAQ EIILNNAKKR FLLVDSTKFE TKSFFTFYSA ENLDAIITDN EINSKIKNKY KKFCKVL
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