Gene Ssol_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2478 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2280641 
End bp2282020 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content36% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionACX92618 
Protein GI261603015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.65738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGG AAACTGAAAA AAATACGCAA CAAGGATTAG CTAAAGGTGT GGTAGGCTAC 
AGAGAGGTGT TAGCTCAAGG CATTGCATCA GGGGCTCCTG CCGCTGCTAC TATTGGAACA
TTAACTGGTG CAGCTGCATT CGCTTATGGC GCTCTTCCAC TAGCTGTAGC AATAGCATTA
ATAATGGTTT TATTGGATGC CACTAGACTA TCTATAATAG CGCGCTATGT TCAGAGTGCG
GGAGGTATCT ACGCTTTTAT TGAAAGGGGT TTAGGTAAGA AGGTTGCCTT TGTCGCTAGT
ATGGCATATA CAATATATAT ATTTGCGGTG ATTATCTTTG TATATTTAAT CATGGGCTTA
ATGGTACCTA CAGGGATTGA AGAACTTGGA ATAAATTTGC CATCGTGGAT TTGGATACCT
TTAGGACTAG TTAACGCTAT AGTAAGTGTT ATAATTTCAT ACTTAGGTAT AAGACCATCC
TTAAAGTTCA CCTTAATCAT GAGTATAGCT GAAATAACTG GCATAATAGC TACTTCAATT
CTTATATTTT CCAAAATCCC GCCCGATATC AATACCTTTA CGCTTGCTTA TGTACCACCC
CCAAAGATAT CAAATTTAGG TTTAGGAGTT TCCTTTGGAA TTCTGGCTTT TACGGGTTAT
GAAACTGTAT CAGTATTGGG TGAAGAGGCT AAAGATCCAA GGAATAATAT AGCAAAAGGA
GTTTTTACAG CAGCCCTTCT ATTAGGTATC ACATATATAG TGGGTTCAGA AGCGTTTACC
GTGGGATGGG GAGTTAATAA CATGAGTACA TATTTTAACT ATTTAGCACC GGGATTAATA
TTGGCTAAAA CCTTCGGAGG TACAATACTA CTAATAATCC TAACAGCCCT TCTAATAAAT
AGTAACCTTG CTTGTGCAAC CGGATTTACT AATTGTGTGA CAAGAGTTAT GTACGCTATG
AGTGTGGACA AATTATTACC ATCTAAATTG AGTTCAATAC ATCCGAAAAG AAGGACTCCG
CATATTGCCA GTCTTTTCAC CTTCATTTTT ACAGCTTTAT ACTTCATTAT AATGTCTCTG
ATATTCTCAC CTTCCAATAT TTTTATAGCT ACTGGAATTA CTACTACGTT CGGATTTTTA
ATAGCGATAT TTGTAGTAAA TATAAGTATG TTAATTGTAG TGAAGAAGAA TAACGCATTA
AATATAGGAA ATATACTTAT TGTAGCAATT GTTGAAGCGA TAATTGGCTA TGTATTTTAT
GCGACTGTTA TAACGAGTGC AATCAATGTG CCGGTATTAA TTGGAGTTTT AACGTTAGTT
TTATGGGTGG TTGGGGGCAT AATTTATCTT ACGCTTAAAA GGTTTTTTAC CCAAAAGTAA
 
Protein sequence
MGKETEKNTQ QGLAKGVVGY REVLAQGIAS GAPAAATIGT LTGAAAFAYG ALPLAVAIAL 
IMVLLDATRL SIIARYVQSA GGIYAFIERG LGKKVAFVAS MAYTIYIFAV IIFVYLIMGL
MVPTGIEELG INLPSWIWIP LGLVNAIVSV IISYLGIRPS LKFTLIMSIA EITGIIATSI
LIFSKIPPDI NTFTLAYVPP PKISNLGLGV SFGILAFTGY ETVSVLGEEA KDPRNNIAKG
VFTAALLLGI TYIVGSEAFT VGWGVNNMST YFNYLAPGLI LAKTFGGTIL LIILTALLIN
SNLACATGFT NCVTRVMYAM SVDKLLPSKL SSIHPKRRTP HIASLFTFIF TALYFIIMSL
IFSPSNIFIA TGITTTFGFL IAIFVVNISM LIVVKKNNAL NIGNILIVAI VEAIIGYVFY
ATVITSAINV PVLIGVLTLV LWVVGGIIYL TLKRFFTQK