Gene Ssol_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2216 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1996285 
End bp1997448 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content41% 
IMG OID 
ProductD-galactarate dehydratase/Altronate hydrolase domain protein 
Protein accessionACX92405 
Protein GI261602802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC CAATAATAAG GGGTTACATT AGGGAAAACG GTAGTGTAGG AGTTAGGAAT 
TACGTAGCTG TAATACCAGT AGATGATTTA TCAAATTCCG CTTCAATAGG GGTATCGAAA
TTAATTAGGG GTACGGTAGC TATTCCCCAT CCCTACGGTA GATTACAGTT TGGTAAGGAT
TTAGACTTAC TCTTTCACGT ATTATCTGGT ACTGGTGCAA ATCCAAACGT AGCTGCTGCA
ATAGTTATAG GAATTGAGGA AAACTGGGCA AATAAGGTAG CTGATAAGAT AGCTGAGACT
GGTAAGCCAG TTGAGGTCTT CCCAGTTGAG GGAAATGGTG ATTTGAAAGT AATAGAGAAA
GCTAGCAGAA AGGCAAAGGA GTTCGTCCAA GAGGCTAGTG AGAAGCAGAG GACTGAAGTG
GACCTATCAT CTTTAGTTTT AAGCATTAAG TGTGGCGAGA GCGATACAAC ATCTGGTTTA
GCGTCAAACC CAGCAACCGG TTATGCTGTG GATAAATTGA TAGATTACGG TTCAACAGTG
ATGTTTGGAG AGACCTCAGA GTTAACTGGT GCTGAAGACA TTGTAGCCAG TAGGATACAA
GATCCGGTTT TGAGGGATAA GTTCATGAGG ATTTATAACG AATACGTTGC TTTCATTGAG
AGTCAAGGAG TCGACCTATT AGGCTCACAA CCAACTGAGG GAAACATTAA GGGAGGATTA
TCGACTATAG AGGAAAAGGC TCTAGGGAAT ATTCAAAAAT TAGGCACTAA ACCAATTACT
TGTGTGTTAG ACTATTTGGA TCCATTAGGG AAGGGATCAT CTAGACTGTG TTTCGTTAAT
ACTTCGTCTG CTGCTGCTGA GGCAGTTACG CTGTTTGCCG CTAAGGGTTC AGTACTTCAC
TTGTTTACAA CTGGGCAAGG GAATGTAGTT GGTCATCCGA TAATTCCTGT AGTAAAAATT
TCCGCAAATC CAAAGACTAT TGCAACAATG AGTGAGCATA TTGACGTTGA CGTTTCTGAT
TTACTTCAAT TGAAGGTTAG CTTAAAAGAA GCAGGGGAAA GAATATTCAA CTATACGATT
AGGGTTGCCA ACGGTAGGTT AACTTCAGCG GAGATATTAC AACATGAGGA GTTCTCTCCA
ATAAAGCTTT ACATAAGTGC TTAA
 
Protein sequence
MEKPIIRGYI RENGSVGVRN YVAVIPVDDL SNSASIGVSK LIRGTVAIPH PYGRLQFGKD 
LDLLFHVLSG TGANPNVAAA IVIGIEENWA NKVADKIAET GKPVEVFPVE GNGDLKVIEK
ASRKAKEFVQ EASEKQRTEV DLSSLVLSIK CGESDTTSGL ASNPATGYAV DKLIDYGSTV
MFGETSELTG AEDIVASRIQ DPVLRDKFMR IYNEYVAFIE SQGVDLLGSQ PTEGNIKGGL
STIEEKALGN IQKLGTKPIT CVLDYLDPLG KGSSRLCFVN TSSAAAEAVT LFAAKGSVLH
LFTTGQGNVV GHPIIPVVKI SANPKTIATM SEHIDVDVSD LLQLKVSLKE AGERIFNYTI
RVANGRLTSA EILQHEEFSP IKLYISA