Gene Ssol_1399 details

Gene Information

• Locus tag: Ssol_1399
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1300566
• End bp: 1301297
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 32%
• Product: transcriptional regulator, TrmB
• Protein accession: ACX91633
• Protein GI: 261602030

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.913675
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTG AATTATTAGA AGAGACCATA AGCAGAGTAT CAAAGTTTGC TTCAATTTTT 
GGAATATCAA AATCGGAATT AAAAGTTTAT TCATATCTCT TAATATATGG ACGAGCAACT 
GCGAGAGAAG TCTCAAACAA GTTAAGCTTA CCATACACTA AAGTATATAA TGTCCTATCT 
AAACTAGAGG GAAGAGGGTG GGTTATAAAA ATAGATAAGA GACCCGCAGT GTACGAGGCA 
ATTCCTTTAA GAGATGTTTG GAATAAGATT AAAATTACTT TTCAAGAAAA ATTGGACGAA 
TTTGAAAAAC AATTTATCGA GCCGATATCT AGTATTTTCT CCTCAAATAT GGCATATAAT 
ATAGTTGTTA TACCAAGAGA TAATATTATG GATAATGCAC TAAGACTACT CAAGGACTAC 
AGCAAGATGT ATTTAGTTGC AATATCCTAT CAAGAGTTCG TAAGAAGCGA TATTATAGAT 
ATATTAAGGG CTAATTCGCT TAAAGCAGAG ACTAAAATAA TAGTCGACAA AAGCGTTAAT 
TTACCAGATA TCTCATCAGC TCAAGTTAAG AGAGCTCAAT CGCTATTTGG CAGTGGTATA 
ATCACATCTG ACTCAATTCT CCTAGTCATA AAGAATAATG ATATATTAAC TGGTCTATTT 
TCAAATCATA AATATCTAAT AGACATCGGC ACAGTATATT TTAATCACTT ATGGTCTACA 
TTACCGGGAT AA 

 

Protein sequence

MSSELLEETI SRVSKFASIF GISKSELKVY SYLLIYGRAT AREVSNKLSL PYTKVYNVLS 
KLEGRGWVIK IDKRPAVYEA IPLRDVWNKI KITFQEKLDE FEKQFIEPIS SIFSSNMAYN 
IVVIPRDNIM DNALRLLKDY SKMYLVAISY QEFVRSDIID ILRANSLKAE TKIIVDKSVN 
LPDISSAQVK RAQSLFGSGI ITSDSILLVI KNNDILTGLF SNHKYLIDIG TVYFNHLWST 
LPG