Gene Ssol_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1164 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp1083247 
End bp1083960 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content31% 
IMG OID 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionACX91402 
Protein GI261601799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.605795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTAT TATTCCTTAG GCCCGATAAT GAAGATAATG AACTCAATGA AAAGCTTATG 
ATACTTCGGA AAAACGGAAT TGAAGTTCTA AACATTCCCA TCTTTAAAAT AAAATGCGTC 
TCATATTCGT TACCGACCTA TGATTATGAG GCACTAGCAT TTACAAGCAG AAATTCAGTC 
ATTTGTTTCA AAGATCGCAC CTTAATTAAA AACGTTCATA AGATATACGC TATCGGAGAA 
GAAACTGCTG AGTTATTAAT GAAAATGTAT AATGTAAATC CGATAACTCC AGAGAGATTT 
ACGAGTATAG AACTAGCTAA AAGAATTTTG GAAGATAAGG TAAATAGTAT ACTTAGCATA 
AGGAGTAGAA AAGCTTCTGA AGATATGAGA AATATTCTTA ATGGCAAAAT TAAATATGAT 
GAGATTTACG TATATGATTC AGAAATAATC AGAGATAATA TAAACGAAAT ATCCAAAATT 
CTAACCGAAT GTGAAGTTGA CGCCATAGCA TTTACTAGTT CGTTGATGGC TAAGCTAATT 
GGTCCTTTTA TTAGGGGTAA GTGTAATATA ATAATCTTTA GCATAGGTCC AATGACGACA 
GAAACTTTGA AACGAGTTAA TAATAAGGTA AAAATAATAG AAAGCAAGAC ACATTCTATT 
AAAGGCATTA TAGAAACTAT TTTAGTGGAG ATGAAACGAA ATGGACGAGA TTAA
 
Protein sequence
MRVLFLRPDN EDNELNEKLM ILRKNGIEVL NIPIFKIKCV SYSLPTYDYE ALAFTSRNSV 
ICFKDRTLIK NVHKIYAIGE ETAELLMKMY NVNPITPERF TSIELAKRIL EDKVNSILSI 
RSRKASEDMR NILNGKIKYD EIYVYDSEII RDNINEISKI LTECEVDAIA FTSSLMAKLI 
GPFIRGKCNI IIFSIGPMTT ETLKRVNNKV KIIESKTHSI KGIIETILVE MKRNGRD