Gene Ssol_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0701 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp647173 
End bp648006 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content35% 
IMG OID 
ProductSqualene/phytoene synthase 
Protein accessionACX90965 
Protein GI261601362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA AACTTGAAGA GATCTTTAAG AAGGGAAGCG TTACATATTA TAATAGCTCT 
TATTTCTTTC CAAAAAAGAT TAGGGAAGAT GTAACTAAAC TTTACGCCTT TGTAAGGGTA
TTTGACGATC TTGTCGATTC TGTTCCACAG AAAATAGAGG AATATTATAA CTTGCGAAAG
CTCTATCAAT TAGAGAAGAG TGGTTATAAT ACTGGAAATA TTGTATTGCA AAATTTCGTT
GAGCTAGCTA GGAGAAAAGG ATTTGAGGAC AGTTGGATAG ATGCTTTTCT AGATGCAATG
GAAAGTGACA TATATAAGAA AGTGTATTAC AGTATTGAGG AACTTTTGAA GTACATGTAT
GGTTCTGCTG AAGTAGTTGG TCTATTCATG ATGAAGATTC TAGATTTACA TAATGACTCA
ATGTACTATG CCAGAATGCT TGGAAGAGCA ATGCAGTTTT TAAATTTCAT CAGAGACGTC
CAAGAGGACC TGTATTTAGG CAGACAATAC TTACCCGTTG AAGATATGGA GAAATTTGGA
ATTGACAAGA TGGAGTGTAA TGAAGGTTTT ATAGAATTCA TAAGATACGA AATTAGCCGT
TACTTTGAAT TTGAAAGGGA GGCAGAAAAG GGGTTTAAGT TCATACCAGC TAGATACTTA
GTTCCCATAA AGACTGCTTC AGAAATGTAT AAGTGGTCTG CGTTGAGGAT AAAGAAGTCT
CCGTGTATCG TATTATCAAA AAAGGTAAAG CCTAGAAGGA CGAAAATAGT GATAACTGTA
ATAAAGAATT TCGCTGGCGT CTATCTATGG AGATCTTTAA ACCCGATTAT TTGA
 
Protein sequence
MIEKLEEIFK KGSVTYYNSS YFFPKKIRED VTKLYAFVRV FDDLVDSVPQ KIEEYYNLRK 
LYQLEKSGYN TGNIVLQNFV ELARRKGFED SWIDAFLDAM ESDIYKKVYY SIEELLKYMY
GSAEVVGLFM MKILDLHNDS MYYARMLGRA MQFLNFIRDV QEDLYLGRQY LPVEDMEKFG
IDKMECNEGF IEFIRYEISR YFEFEREAEK GFKFIPARYL VPIKTASEMY KWSALRIKKS
PCIVLSKKVK PRRTKIVITV IKNFAGVYLW RSLNPII