Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0701 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 647173 |
End bp | 648006 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | Squalene/phytoene synthase |
Protein accession | ACX90965 |
Protein GI | 261601362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA AACTTGAAGA GATCTTTAAG AAGGGAAGCG TTACATATTA TAATAGCTCT TATTTCTTTC CAAAAAAGAT TAGGGAAGAT GTAACTAAAC TTTACGCCTT TGTAAGGGTA TTTGACGATC TTGTCGATTC TGTTCCACAG AAAATAGAGG AATATTATAA CTTGCGAAAG CTCTATCAAT TAGAGAAGAG TGGTTATAAT ACTGGAAATA TTGTATTGCA AAATTTCGTT GAGCTAGCTA GGAGAAAAGG ATTTGAGGAC AGTTGGATAG ATGCTTTTCT AGATGCAATG GAAAGTGACA TATATAAGAA AGTGTATTAC AGTATTGAGG AACTTTTGAA GTACATGTAT GGTTCTGCTG AAGTAGTTGG TCTATTCATG ATGAAGATTC TAGATTTACA TAATGACTCA ATGTACTATG CCAGAATGCT TGGAAGAGCA ATGCAGTTTT TAAATTTCAT CAGAGACGTC CAAGAGGACC TGTATTTAGG CAGACAATAC TTACCCGTTG AAGATATGGA GAAATTTGGA ATTGACAAGA TGGAGTGTAA TGAAGGTTTT ATAGAATTCA TAAGATACGA AATTAGCCGT TACTTTGAAT TTGAAAGGGA GGCAGAAAAG GGGTTTAAGT TCATACCAGC TAGATACTTA GTTCCCATAA AGACTGCTTC AGAAATGTAT AAGTGGTCTG CGTTGAGGAT AAAGAAGTCT CCGTGTATCG TATTATCAAA AAAGGTAAAG CCTAGAAGGA CGAAAATAGT GATAACTGTA ATAAAGAATT TCGCTGGCGT CTATCTATGG AGATCTTTAA ACCCGATTAT TTGA
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Protein sequence | MIEKLEEIFK KGSVTYYNSS YFFPKKIRED VTKLYAFVRV FDDLVDSVPQ KIEEYYNLRK LYQLEKSGYN TGNIVLQNFV ELARRKGFED SWIDAFLDAM ESDIYKKVYY SIEELLKYMY GSAEVVGLFM MKILDLHNDS MYYARMLGRA MQFLNFIRDV QEDLYLGRQY LPVEDMEKFG IDKMECNEGF IEFIRYEISR YFEFEREAEK GFKFIPARYL VPIKTASEMY KWSALRIKKS PCIVLSKKVK PRRTKIVITV IKNFAGVYLW RSLNPII
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