Gene Ssol_0482 details

Gene Information

• Locus tag: Ssol_0482
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 428412
• End bp: 430493
• Gene Length: 2082 bp
• Protein Length: 693 aa
• Translation table: 11
• GC content: 38%
• Product: extracellular solute-binding protein family 5
• Protein accession: ACX90763
• Protein GI: 261601160

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.181954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAAGG AATTAGTATT AGAAGTAGGT GTAATATTCT CGATATCTGT AATGCTCTTT 
TCAATCAGTG GTATAATGAT AGCCAACTCA GCATCTTCAC CATTTCCGTC AACCCTTTAC 
TTAGGATGGT ATAATTCTAA CGTCGAAGCT TATTCTTCAT TTGCTACTTA TAATCCCAAT 
ATATTTGCAG GAGGTTTAGG TGGATCTTTT TACGGATTGC TCTATGCATA CTCTGCAATA 
ATTAATGTTA GTAATTCTCA AGCGATTCCC GTGATAATAA CTTCATGGAA CTTCTCTCCA 
GCAAGCTGGC AGCAGATTTG GCAGACAAAA CCGGTTAATG TGACGCTGAT TATACGCAAT 
GATTCTGGTT GGAGTAATGG GCAACCTCTC ACTGCTTACG ATCTTATGGC CACATGCCTA 
ATTTTAGATA TGTTTGGTGC TCCGCCATTT CCTAATTATA CTGTTATTAA TAATTACACG 
CTAGTTGAGA CTTGGCCTCC AGATACGTTA TCACCGATAT TGTTTACAGA CACGCTAATT 
AATACGGTAG GCTTAGGGGA AGTTGCAATT ATAATACCAT ACCAAGTTTG GAAGCCTATA 
ATTAGTCAGA TAATGGGCAA TTGGACAACA ATACAAAATA CAAGCAATAT GAAACTTGCG 
CAGCAGATTA TTAAGAATAT TAGGTCAGAA ATCCTTCACT TTAGACCAAA CCCTGCCACA 
TATCCTTATA GTGGTCCGTT CTACCTATCA CAGTTATCAT CGAATGAAAT AGTACTAAAT 
AAGAATCCAT ATTATTATGA CGCTAAATAT ATACCATTCA ATCAAGTAAT AATATATCAA 
TACGGTCAGG CTGACTTAGC AGCAGCTGCA ATAACGGGTG GTCAAGTTTC TATGGACTGG 
TCCGGTTTGA CAGGATTATC ACCAACGCAG CTAGAAAGTT TGCCGACCAC ACTTGAGGTA 
ATTAATATAC CTCAACCATT TGGCTGGGGT ATAGCATTCA ATCTGAAGAA TCCATGGTTA 
AGAGAGTATC AAGTAAGGGC GGCAATTGCA TATATTCTAA ATAGGACTGC CATAGCTTCA 
GTGGGAGGTC CTTTAACAGC ACCGGTTACT ATTCCTAATG CAATACCCAA TTTATCGTAC 
TATTCATTCA TGACATCTTC GCAATACTAC TCATCTTTAA ATCCGTATAA TGTTAATTTA 
ACAAAGGCAG CACAGCTGCT TAAGAGTGTA GGGTTTTACC AGAAGTCTGG AGTTTGGTAT 
ACTCCAAATG GTACACCGTT TACTTTAACA ATAGGTGCTG GAAGTCCACC AACGCAAGCA 
CTAGCAATGA TGGAAGAAGT ACAAAAAGAA TTACAGCAAT TTGGAATTAA CGTACAATTA 
CACATATATA CTGTAGTTAG TCAGTGGCAT CAAGCATGGC AAAATGGTAC CGGCTATGAT 
TTATGGTTTG AGAATTGGGG TAGTTCATAC TCGCCGGGGA CTGCACCATG GAGTTTGGTA 
CTTTCTTATT TTGGAGGATA TCCATGGAAT GTTACACAGT GGAATGAGAA TCTTACTTTA 
CCTAATGGTA CTATAATTGA CTTCCATAAA TTACTTGAGG AAACCGAGTC TCCTAATACC 
ACACAACAGT TAATACAAGC TAATCAAGAG TTATCATATT ATATGAACCA ATACTTACTT 
CCAATCTTAC CTCTAGTTGA GATCGAGAAT TACGTCATTG TAAATCCCTC GCTACTTATT 
GCAGCTCCAC CTGCTAATTC GTGGATATGG GAAGAGGCAC AATACGGTAT AGGTGGTACT 
GCTATGGTAC AAGCTCTAAT AGATTATTGG TACGCCCCAT TATATGAGAG CACTATAATT 
ACTACAACTA CGACTTCTAT TTCTACTACT ATAACTACAA CAACCACTTC CGCAACAACA 
GCTACCACGT CTGTAACTAC GACTACGTCT GTAACTACGA CTTCTATTTC TACTACTACA 
GTTACTGTGA CTTCTACTTC AACTATTCCA ATTATAATAG CAATAGTTAT AGTTATTATT 
GTTATAATTG CTGCTGTGGC AATATTAATG AGAAGGAGAT AA 

 

Protein sequence

MRKELVLEVG VIFSISVMLF SISGIMIANS ASSPFPSTLY LGWYNSNVEA YSSFATYNPN 
IFAGGLGGSF YGLLYAYSAI INVSNSQAIP VIITSWNFSP ASWQQIWQTK PVNVTLIIRN 
DSGWSNGQPL TAYDLMATCL ILDMFGAPPF PNYTVINNYT LVETWPPDTL SPILFTDTLI 
NTVGLGEVAI IIPYQVWKPI ISQIMGNWTT IQNTSNMKLA QQIIKNIRSE ILHFRPNPAT 
YPYSGPFYLS QLSSNEIVLN KNPYYYDAKY IPFNQVIIYQ YGQADLAAAA ITGGQVSMDW 
SGLTGLSPTQ LESLPTTLEV INIPQPFGWG IAFNLKNPWL REYQVRAAIA YILNRTAIAS 
VGGPLTAPVT IPNAIPNLSY YSFMTSSQYY SSLNPYNVNL TKAAQLLKSV GFYQKSGVWY 
TPNGTPFTLT IGAGSPPTQA LAMMEEVQKE LQQFGINVQL HIYTVVSQWH QAWQNGTGYD 
LWFENWGSSY SPGTAPWSLV LSYFGGYPWN VTQWNENLTL PNGTIIDFHK LLEETESPNT 
TQQLIQANQE LSYYMNQYLL PILPLVEIEN YVIVNPSLLI AAPPANSWIW EEAQYGIGGT 
AMVQALIDYW YAPLYESTII TTTTTSISTT ITTTTTSATT ATTSVTTTTS VTTTSISTTT 
VTVTSTSTIP IIIAIVIVII VIIAAVAILM RRR