Gene Ssol_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0253 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp215406 
End bp216764 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content38% 
IMG OID 
ProductTIP49 domain protein 
Protein accessionACX90549 
Protein GI261600946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.632673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAGA TACGTGAGTT AAAGAAACCT ATACGTGAAA AAGCGAGTAT TCATAGCCAT 
ATTAAAGGTT TAGGCTTGGA TAGTAATGGG AAAGCGAAAT TTATTGCAGA TGGGCTGGTT
GGCCAAGCTG AGGCCAGAGA GGCAGCAGGG GTTGTTGTAC AACTAATAAA ACAAGGAAAG
ATGTCCGGAA AAGGGATACT ATTTGTTGGC CCTCCGGGAA CCGGAAAAAC CGCATTAGCT
GTAGCAATTG CCAGGGAATT AGGTGAGGAT ACTCCATTTA CTGCAATTAA TGCTTCTGAA
ATATACTCTA CAGAACTTAA GAAAACTGAA ATATTAACTC AATTAATAAG GAAATCAATC
GGTGTGAGAA TTAGAGAAAA AAGGCTAGTG TACGAAGGTG TCGTGAAAAA TAGGAAGATT
AAGGTTGCCA GAAGTAGACT AAATCCCTAT TCTCAGGCTC CAGTTGAGGC TCAAATAACT
TTGACTACTA AAGATGATGA AAGGACATTA TCAGTAGGTG AGGAAATAGC TCAACAACTA
GTATCCTTAG GCGTTAAGAA GGGCGATGTT ATCATGATTG ATGCTCAAAC TGGACAGGTC
ATAGTTGAAG GAAAGGCTAA AGGTTTTGAG GGTGCCAAAA CCTATGATAT AGAGACCACG
AAAGTGCTAG AGATGCCTAC TGGACCTGTG CGAAAAGAAA AGGAAATAAC CACTACGCTA
ACCTTAAACG ATTTAGATTT GAATTTAGCA GCTAGAAATC TAGCTGTTAC GGCTATTTTC
TCGTTCTTTA CTGAAAGAGA AATAAACGAG GACGTCAGAA AAGAAGTTGA TAGACTAGTT
AAGGATTGGA TTAATCAAGG TAGGGCGGAA TTGGTAGTTG GAGTCCTATT TATTGACGAC
GCTCATACGC TCGATTTAGA AGCGTTCTCA TTCCTAACTA GGGCTCTAGA GTCTGAACTA
GCTCCAATAC TAATCTTAGC AACCAATAGG GGCATAACTA AAATTAGAGG TACTGATATA
GAATCGCCTC ATGGGATTCC TCTTGACCTA TTAGACAGAT TATTGATAAT ACCGACTAGA
CCTTATAATG CTGATGAAAT TAAAGAGATA ATTAAGATTA GAGCCGATGA ATTAGAAATT
GAATTAGATC CTCAAGCTTT AGAGGAATTA ACTAAAATAG GTGTAGAAAA TAGTCTGAGA
TACTCTGTTC AACTACTAGA ACCATCTCTT GTAATTGCCC AAAGAAATAA TAGGAGCGTT
ATAAAGGTTG AAGATGTATT AGAGGCTTCA AAACTATTCT CGGATGTTAA GAGGAGTGTA
AAGTTTGTAA AGGAGTATGA GAATCTATTA TTGAAATGA
 
Protein sequence
MSEIRELKKP IREKASIHSH IKGLGLDSNG KAKFIADGLV GQAEAREAAG VVVQLIKQGK 
MSGKGILFVG PPGTGKTALA VAIARELGED TPFTAINASE IYSTELKKTE ILTQLIRKSI
GVRIREKRLV YEGVVKNRKI KVARSRLNPY SQAPVEAQIT LTTKDDERTL SVGEEIAQQL
VSLGVKKGDV IMIDAQTGQV IVEGKAKGFE GAKTYDIETT KVLEMPTGPV RKEKEITTTL
TLNDLDLNLA ARNLAVTAIF SFFTEREINE DVRKEVDRLV KDWINQGRAE LVVGVLFIDD
AHTLDLEAFS FLTRALESEL APILILATNR GITKIRGTDI ESPHGIPLDL LDRLLIIPTR
PYNADEIKEI IKIRADELEI ELDPQALEEL TKIGVENSLR YSVQLLEPSL VIAQRNNRSV
IKVEDVLEAS KLFSDVKRSV KFVKEYENLL LK