Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4361 |
Symbol | hslO |
ID | 5610940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5337834 |
End bp | 5338694 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640935331 |
Product | Hsp33-like chaperonin |
Protein accession | YP_001476091 |
Protein GI | 157377491 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAG ATAATTTACA CCGCTACCTA TTTGAAAATG CTGACGTCCG AGGCGAATTG GTACAGCTTG AGCAGAGTTA TCAAGAGATC CTCTCGGCTC ATACTTACCC TACACAAATT CAGGAACTCT TGGGTGAGTT GATGGCAGCC ACATCACTGC TAACCGCTAC GCTGAAGTTC AGCGGTGATA TCAGTGTTCA ACTTCAAGGA GATGGCCCTA TCTCACTTGC TGTAATCAAT GGCAACAACC TTCAACAACT CAGAGGCGTT GCTCGCTGGG ATGGCGAACT AAGCGATGGT GCGACCCTGC AGCAACTGTT CGGCAAAGGG CATATGGTCA TCACCTTAAC CCCAGCGAAA GGAGAACGCT ATCAAGGGGT TGTAGCGCTA GACAAAGATT CTCTTGCCGC ATGCCTTGAG GAATATTTTA CTCAGTCTGA ACAGTTACCC ACTAAAATAT CTCTGTTTGC CAACGGTAAA CAAGCTGCCG GTATGTTGCT TCAGGTCCTA CCGAGCGAAG GCGATCACAA TGCAGAGTTT GAACACTTAG AGCAACTCAC CGCAACGGTT AAAGCCGAAG AGCTTTTCGA ACTGGAAGCC GAGGAGGTAT TACATCGACT CTATCATCAG GAAGAGGTTC GCCTGTTTGA CCCTATCGAA GTGACTTTCT CATGTACCTG TTCCAGAGAG CGTAGTGCCT CGGCAATTCG CACCGTTTCA AAAGCTGAAA TTGATACGAT CATTGCCGAA CAGGGTAAGA TTGAGATGGG TTGTGAATAC TGCAATACCA CCTATGATTT TGATTCAATT GATGTTGAAG CTATTTTTAG CAACACACAG GCACCAGAGA CCAAACAGTA A
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Protein sequence | MSKDNLHRYL FENADVRGEL VQLEQSYQEI LSAHTYPTQI QELLGELMAA TSLLTATLKF SGDISVQLQG DGPISLAVIN GNNLQQLRGV ARWDGELSDG ATLQQLFGKG HMVITLTPAK GERYQGVVAL DKDSLAACLE EYFTQSEQLP TKISLFANGK QAAGMLLQVL PSEGDHNAEF EHLEQLTATV KAEELFELEA EEVLHRLYHQ EEVRLFDPIE VTFSCTCSRE RSASAIRTVS KAEIDTIIAE QGKIEMGCEY CNTTYDFDSI DVEAIFSNTQ APETKQ
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