Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4245 |
Symbol | |
ID | 5611277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5214894 |
End bp | 5215346 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640935204 |
Product | hypothetical protein |
Protein accession | YP_001475977 |
Protein GI | 157377377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000472538 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACAACAT TATTGAGTTC ACTCAAGGTC ACCGTTCGCC CAGCCGACGG CAGCAGCAAC CCACTCATTC TACGAAGGGA GAAGCTACTC ACTAAGCTCG GCCAGCAGAA GATATTGGCC ACTGCACTAG TCGAGAACGA AACCCACACC TTCTACCGTG AAAAGTGGGT CAAAGATGAA GAGACAGGCG AGAGGGAAAA GGTACAGGTG CCGAAGAAAG TCAGCCCTTG GTTCTACAAA CGCAACAACC GTTACTACCT AGAGGTGCGT AGTGGTAACA AACCATTGGA ACTGCAAAAA GGGATGCACG CCATCGAGGT TGGCGAAGAG GAGGAGTTAG TTAACACCAT CGACACCATT ATCGAAGCGG TGGTAGCGGG TGAGCTCGAC CCCTTGCTAA CTAAGGGAGA TAAGCCGGGC ACAAAGAAGG ATAAGACTAA CGGTAAGAAG TGA
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Protein sequence | MTTLLSSLKV TVRPADGSSN PLILRREKLL TKLGQQKILA TALVENETHT FYREKWVKDE ETGEREKVQV PKKVSPWFYK RNNRYYLEVR SGNKPLELQK GMHAIEVGEE EELVNTIDTI IEAVVAGELD PLLTKGDKPG TKKDKTNGKK
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