Gene Ssed_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4245 
Symbol 
ID5611277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5214894 
End bp5215346 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content51% 
IMG OID640935204 
Producthypothetical protein 
Protein accessionYP_001475977 
Protein GI157377377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000472538 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACAACAT TATTGAGTTC ACTCAAGGTC ACCGTTCGCC CAGCCGACGG CAGCAGCAAC 
CCACTCATTC TACGAAGGGA GAAGCTACTC ACTAAGCTCG GCCAGCAGAA GATATTGGCC
ACTGCACTAG TCGAGAACGA AACCCACACC TTCTACCGTG AAAAGTGGGT CAAAGATGAA
GAGACAGGCG AGAGGGAAAA GGTACAGGTG CCGAAGAAAG TCAGCCCTTG GTTCTACAAA
CGCAACAACC GTTACTACCT AGAGGTGCGT AGTGGTAACA AACCATTGGA ACTGCAAAAA
GGGATGCACG CCATCGAGGT TGGCGAAGAG GAGGAGTTAG TTAACACCAT CGACACCATT
ATCGAAGCGG TGGTAGCGGG TGAGCTCGAC CCCTTGCTAA CTAAGGGAGA TAAGCCGGGC
ACAAAGAAGG ATAAGACTAA CGGTAAGAAG TGA
 
Protein sequence
MTTLLSSLKV TVRPADGSSN PLILRREKLL TKLGQQKILA TALVENETHT FYREKWVKDE 
ETGEREKVQV PKKVSPWFYK RNNRYYLEVR SGNKPLELQK GMHAIEVGEE EELVNTIDTI
IEAVVAGELD PLLTKGDKPG TKKDKTNGKK