| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4187 |
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| Symbol | |
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| ID | 5612168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5146487 |
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| End bp | 5147560 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935146 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475919 |
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| Protein GI | 157377319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.429179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAA AAATAAGCCT AACTCTTACC CTGTTACTGA CTCACCTTCC AGCACTTGCT
GCCACTGAGA CCGAATATGA GCTGGGTGGT TTCCTCAAAG CCAATGCCCG CTACGTCGAC
GGCACCATTG CTTTCCAACC CAGCTGGAAC GGGGACGGAA CGATTCAGGA GGAGGCCAAA
CGCACCCAAT TTGGCGCTCA GGAGAGTCGC TTTAACCTCA AGCTGATCCG GGGAGAGATC
ACCGGGTTTG CCGAGATTGA CTTTGTCGGC TCCTCTCAGG GCAACCCGGT CATCTCGAAC
TCTTACAGCC CGAGACTCAG ACATGCGATG ATCCAATACC GGGAGTTTAC GGCCGGCCAA
ACCTGGTCAA CTCTGGTCAA CACCAGCACC TTCGCCGAAA CGGCAGATCT TGGCGGTCCC
TTAGTAGGAC AAGCTATGGT GAGGCAGGCG CTGCTGAGGT ATCAAACGGA TCATTGGCAA
GTCGCTCTGG AAAACCCCTA TACCTATGGC ACACAGGCTA GCGATACTCA GGAACAAAAA
AACTGGATAG AGACAGATAA TGACTATATT CCCGACGCCA TAATCCGTTA TGACCAACAA
GGCAGCTGGG TGAACATCTC AGTGTCAGGC CTCATCAGAT ATCTGGATCC CAGCGATACG
GCGCAGCTGG GTTTGGGCGG TTCACTCGCG GCTAAAATAA ATACCTTTGG AAAGGACGAT
CTGAGGTTTC AGTTGCACTA CGGCAATCTG GGGCGTTATG TCGGTACCGA TGCGGCTAAA
GATATTATCT GCGGGGAGAT AGAGACCACC AGCTCGGCGA TGGTCGCCTA TCGCCACTTC
TGGAGTGAGA CTACCCGTTC GAGTCTTTTC TATGGTCACA CCCGTACGGA GGTGGAACAG
ACGGATCGCT CTCACTTCGG CGTGAACCTG TTCACCAACT TAACCCCGGG ACTAAGAGTC
GGAGTTGAAC TCGGGCGATA TCAGATCGAC GACAGTCAAT ACTCATGGTC GAGCAAGCAG
GTACAAACGG GACAATCTAA CTATGCTCAG TTCACCCTGC AGTTCCATAT ATAA
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| Protein sequence | MNIKISLTLT LLLTHLPALA ATETEYELGG FLKANARYVD GTIAFQPSWN GDGTIQEEAK
RTQFGAQESR FNLKLIRGEI TGFAEIDFVG SSQGNPVISN SYSPRLRHAM IQYREFTAGQ
TWSTLVNTST FAETADLGGP LVGQAMVRQA LLRYQTDHWQ VALENPYTYG TQASDTQEQK
NWIETDNDYI PDAIIRYDQQ GSWVNISVSG LIRYLDPSDT AQLGLGGSLA AKINTFGKDD
LRFQLHYGNL GRYVGTDAAK DIICGEIETT SSAMVAYRHF WSETTRSSLF YGHTRTEVEQ
TDRSHFGVNL FTNLTPGLRV GVELGRYQID DSQYSWSSKQ VQTGQSNYAQ FTLQFHI
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