| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4091 |
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| Symbol | |
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| ID | 5610609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5005338 |
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| End bp | 5008520 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935046 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001475823 |
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| Protein GI | 157377223 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA CTGTGGGTAA AAAAACTAAA CAGATCTCTA TTCGATTTAC CGTTATTAGT
ATTTTTATTT TAGCGACTAT GCTGACGGCT GCGATAGCGA TCGGTTTGCA GTATTATTTC
AGTAAATCCA TGGCCAGTGA CTCCGCCTCA AAAATTTATA GCCTCACCGC CCACCACACC
AGCGACTTTC TGACTCAAGT CGATGAAAAA GCAGTCAATA CCGCAAAACT CCTCTCCAGT
CTCAGTAATC TTATCAATGC CGAAAATCTA GATGATGATG CCAAACCAGT GTTTGCCGAT
GTCATGGAGA GTAATGCGCT GTTCTATGCC ATATATATCG GCTTTCCTAA TGGTGATTAT
CATGGGTTGA TTAATCTTGA GGTCAGTCCT GGCGCCAGAG AGCAGTTTCA AGCTTCCCAT
GCCGATAGGT GGGTATATAT ATTGGTAACG GGTCAAGGGA GTGCGCGGCT GCGGGAATAC
TTCTATCTGG ATGACCAATT AAACCTAAGG GCCCAACGTT CAGAATCCAG TGATTATTAT
GCGAATGAGC GCCCCTGGTA TGGGAATGCC AAGGTGCATG AGGTGTACAA ATCTGAACCT
TACCTATTTC ATCACCTGCA GGCGCCGGGT GAAACTTACT CGATTAAGAT TCCCGGATCT
GAAGTTGTGT TAGCCGTCGA TATCGCCCTC TCTTCGGTAT CTGATTACCT GCAGACTCAA
GACCTGAATG ATCGCGGTGA TGCCTTTAGC GAGATATACC TCTATAAGCG CAGCGGAGAG
TTGATCGCAT CGAATCAAAA GGAGCCGGAA CAGTATCCCA TTCCTAAGGC TCAACCACTG
AAGCTCACTT CGGCGCAACA GCAGATCGTT GCCGAGCATT CGATGATTAA GGTGTCGAAT
GAGAACGACT GGGCCCCTAT CGATTTTTCC AAGTCGGGGA TGCCGAAAGG GTATAGCATA
GATCTGTTAA ACCTAATATC GGATATGACC GGAGTCGAGT TCGACTACAT CAATGGGTTC
ACCTGGCCTG AGTTGGTTGA GGGGTATAAG CGGGGGGAGA TTGGGATGCT CAACTCGCTC
TATAGAACCG CTGATAATGA GAGCATGGGG CATTTTACCG ACCCATTTTT GAAGCTGCCT
TTAGTCGTCG TGACCCGGCA GGGTATCGGT GAACTGACCC ATATCGATGA ATTAGTGGGT
AAGACAGTCG CAATACCTGA GGGCTGGTTC GTCATTGCGG CGATTAAGAC TCATTTCCCC
GACATTAAAG TGGTGGAGTT GGCCTCTACT AAAGCCGTAT TACAAGCCGT TGCTGATGGT
GATGTGTTTG CGGGGGTAGA TAATGGGGTG ATTTTACACT ACACGGCGAA GCAGTTCTTT
ATTGAAAACC TTGCTTATCA TGAATCGGTA GATTTTAGTT TGGCAACAAA TTCCGGCGAC
CTCTATTTCC TACTCAACGA TGCCAATAAG GAGTTGGTGG AGATTTTCAA TCTCGCAATG
GCGAATATAT CACAGGAGCA AAAGGCTGCC TTGAGACTGA AATGGTTCGG CAATGGGAAT
AAGGTGAAGC AGGTAAAAAG TATGGGAGGC GTACCATATC CGGAGCTTAT TGAAATAGCG
AATAATCCAA GTGACTATAA CCAGCTTTTA TCCAGAACGA TTGAGGGCGT TAAGCAGTTT
ATCTATGTGA CACAGGTTGG CTCTAAGGGG AAAGAGGGGG ATATTTTTGC CGTCATCGTT
CCCGAAGATA CAGTGTTAGG CCCCAGTCTG GAAAAGGTGA CAAGCTCCAT TCTTATCACC
AGTATCTGTT TACTGCTGGT CTTGCCTATC TCATGGCTGT TCTCCGCTCC TATCATCAAC
CCGATTAAGC TGCTTTCGGC TGAAAATGAA AAGATAAAAC ATAGGAAATA TAAAGAGCTT
CATACGGTCG ACACCAATAT CAAAGAGATC AAAGAGCTGG CAGATTCAAT GCTGGATATG
TCGATGTCGA TTCAGCAATA TGAAGAGAGC CAAAAGGAGC TGATGGAGGC ATTCATCCGT
CTTATCGCTC AGGCGATCGA TGATAAGTCT CCTTATACCG CAGGTCATTG TAATCGGGTT
CCTGAGTTGG GATTAATGTT GGCCGATGCG GCGGCAGAAT CGACTTCGGC TCCCTTCAAA
AATTTCTATT TCAAATCTGA GGATGAGCAC CGCGAGTTCA GGATTGCCGC CTGGCTGCAC
GACTGTGGCA AGATAACCAC CCCGGAATAT ATTGTCGATA AAGGCACTAA GCTCGAAGCG
ATCTATAACC GGATCCATGA GGTGAGAATG CGCTTCGAAG TGCTCTGGCG CGATGCCGAG
ATAGAATTTT TTAAACAAAT ACTACAGGCT CCTGAAAATG AGGAGGCGTT GCGCTGTGAA
CTGGTCGCTA AGCAGAGTCA ATTGACAGAA GATTTTGAGT TCATTGCCAG CGCGAACGTC
GGTGGTGAGT TTATGGATGA GAAGCATATC GAACGTCTTC ACCAGCTGGC TAATATGACC
TGGGTGCGGC ACTTTGATAA TCGATTAGGG CTGTCACCAG TTGAGGAGCT AAGTTATAAA
GAGCAGTTGG ATAGCTGCGA CTCACTGCCT GTGATTGAGC CGTTACTCAG CGATAGAACC
GAACATATTA TTAAGCGAAT ATCTCAAGTC GATTTCGATC CTAAGTTTGG TATCAAGATG
GAGATCCCTG AAGATCAATA CAATCTTGGC GAGCTCTATA ACTTGTCCAT CTCAAGAGGA
ACATTAACCG CTGAGGATAG GTTTAAAATT AATGAACATG TCACCAGTAC GATAAAGATG
CTGGAGAACC TGCCTTTTCC TCCTGAGCTG GCGAGAGTGC CACGATATGC ATCGACCCAC
CATGAAACCT TGAAGGGAAC CGGTTACCCG AGAAAGCTTA GCGCAGAAGA GTTATCCATT
CCCGAGCGTA TCTTGGTTGT CGCAGATATA TTCGAAGCGC TCACTGCTGC AGACAGACCC
TATAAGAAGG CCAAGCCTAT CAGTGTTGCC GTGGACATTC TGTATAAGAT GGCGCTCGAT
AATCACTTAG ATATGGATCT GTTTAAACTC TTCCTCTCGA GTGGAATATA CCTGGAATAT
GCCAACAAAT TCCTCGATTC TAAACAGATA GACGAGGTCG ATGTGGCTAA GTATTTAAGT
TAA
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| Protein sequence | MKSTVGKKTK QISIRFTVIS IFILATMLTA AIAIGLQYYF SKSMASDSAS KIYSLTAHHT
SDFLTQVDEK AVNTAKLLSS LSNLINAENL DDDAKPVFAD VMESNALFYA IYIGFPNGDY
HGLINLEVSP GAREQFQASH ADRWVYILVT GQGSARLREY FYLDDQLNLR AQRSESSDYY
ANERPWYGNA KVHEVYKSEP YLFHHLQAPG ETYSIKIPGS EVVLAVDIAL SSVSDYLQTQ
DLNDRGDAFS EIYLYKRSGE LIASNQKEPE QYPIPKAQPL KLTSAQQQIV AEHSMIKVSN
ENDWAPIDFS KSGMPKGYSI DLLNLISDMT GVEFDYINGF TWPELVEGYK RGEIGMLNSL
YRTADNESMG HFTDPFLKLP LVVVTRQGIG ELTHIDELVG KTVAIPEGWF VIAAIKTHFP
DIKVVELAST KAVLQAVADG DVFAGVDNGV ILHYTAKQFF IENLAYHESV DFSLATNSGD
LYFLLNDANK ELVEIFNLAM ANISQEQKAA LRLKWFGNGN KVKQVKSMGG VPYPELIEIA
NNPSDYNQLL SRTIEGVKQF IYVTQVGSKG KEGDIFAVIV PEDTVLGPSL EKVTSSILIT
SICLLLVLPI SWLFSAPIIN PIKLLSAENE KIKHRKYKEL HTVDTNIKEI KELADSMLDM
SMSIQQYEES QKELMEAFIR LIAQAIDDKS PYTAGHCNRV PELGLMLADA AAESTSAPFK
NFYFKSEDEH REFRIAAWLH DCGKITTPEY IVDKGTKLEA IYNRIHEVRM RFEVLWRDAE
IEFFKQILQA PENEEALRCE LVAKQSQLTE DFEFIASANV GGEFMDEKHI ERLHQLANMT
WVRHFDNRLG LSPVEELSYK EQLDSCDSLP VIEPLLSDRT EHIIKRISQV DFDPKFGIKM
EIPEDQYNLG ELYNLSISRG TLTAEDRFKI NEHVTSTIKM LENLPFPPEL ARVPRYASTH
HETLKGTGYP RKLSAEELSI PERILVVADI FEALTAADRP YKKAKPISVA VDILYKMALD
NHLDMDLFKL FLSSGIYLEY ANKFLDSKQI DEVDVAKYLS
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